We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ATP6V1D
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:23.7RPKM
FANTOM5:152.4Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA031515

 

Antibody HPA057316

 

Glial cells

Low   Not detected  

Neuronal cells

Medium   Not detected  
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

23.7

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 23.7
Samples: 94

Max RPKM: 52.5
Min RPKM: 5.2
Std RPKM: 11.1
Median RPKM: 22.4
GTEX-13O3O-0011-R1b-SM-5KM2K 52.5
GTEX-X585-0011-R1B-SM-46MVE 50.8
GTEX-PVOW-0011-R1A-SM-32PL6 48.3
GTEX-N7MS-0011-R1a-SM-2HMJG 47.3
GTEX-131XH-0011-R1a-SM-5DUWA 46.9
GTEX-T6MN-0011-R1A-SM-32QOY 43.3
GTEX-139TT-0011-R1a-SM-5LZVD 39.5
GTEX-144GL-0011-R1a-SM-5PNZ5 39.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 38.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 37.6
GTEX-WWYW-0011-R1A-SM-3TW8G 36.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 36.6
GTEX-13JUV-0011-R1a-SM-5LZY4 35.4
GTEX-13FXS-0011-R1a-SM-5K7U6 35.3
GTEX-13FLW-0011-R1b-SM-5LZX2 35.0
GTEX-QDT8-0011-R1A-SM-32PKS 33.6
GTEX-12WSF-0011-R1a-SM-5DUVI 33.6
GTEX-WL46-0011-R1A-SM-3LK6M 33.4
GTEX-1313W-0011-R1b-SM-5EQ4A 33.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 33.3
GTEX-12WSE-0011-R1b-SM-5GU4V 33.2
GTEX-145MH-0011-R1b-SM-5PNWY 32.9
GTEX-QVJO-0011-R1A-SM-2S1QI 32.8
GTEX-YFC4-0011-R1a-SM-4V6EH 32.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 32.6
GTEX-R55E-0011-R1A-SM-2TC6N 32.1
GTEX-WZTO-0011-R1B-SM-3NMAR 31.9
GTEX-RNOR-0011-R1A-SM-5SI8F 31.9
GTEX-XOTO-0011-R1B-SM-4B65C 30.5
GTEX-12WSH-0011-R1a-SM-5GU5V 30.0
GTEX-13NYB-0011-R1b-SM-5KM4F 29.4
GTEX-13N2G-0011-R1b-SM-5MR3G 28.9
GTEX-N7MT-0011-R1a-SM-5SI7S 28.8
GTEX-T5JC-0011-R1A-SM-32PM6 27.1
GTEX-ZUA1-0011-R1a-SM-4YCE2 27.0
GTEX-13G51-0011-R1a-SM-5LZYR 26.8
GTEX-QMR6-0011-R1A-SM-32PKW 26.8
GTEX-13N1W-0011-R1b-SM-5MR4T 26.5
GTEX-TSE9-0011-R1A-SM-3DB7E 26.5
GTEX-P44H-0011-R1A-SM-3NM8J 25.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 25.6
GTEX-14ASI-0011-R1b-SM-5S2TY 24.8
GTEX-QVUS-0011-R1A-SM-3GAD2 24.3
GTEX-12WSD-0011-R1b-SM-5LZVY 23.9
GTEX-13X6I-0011-R1b-SM-5PNZC 23.5
GTEX-NPJ7-0011-R1a-SM-3GACT 23.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 22.5
GTEX-12WSM-0011-R1a-SM-5LZW6 22.3
GTEX-S7SE-0011-R1A-SM-2XCDE 21.7
GTEX-13112-0011-R1b-SM-5HL7K 21.6
GTEX-131YS-0011-R1a-SM-5DUXC 20.2
GTEX-PWO3-0011-R1A-SM-2I5EW 20.0
GTEX-UTHO-0011-R1A-SM-3GIJO 19.7
GTEX-1399T-0011-R1b-SM-5DUWN 19.6
GTEX-X4XX-0011-R1B-SM-3P622 19.6
GTEX-145LS-0011-R1b-SM-5PNUP 18.8
GTEX-13OW7-0011-R1b-SM-5L3HF 18.7
GTEX-WVLH-0011-R1A-SM-4MVOK 18.2
GTEX-NL3H-0011-R1a-SM-48TDJ 18.1
GTEX-13NYS-0011-R1b-SM-5MR55 17.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 17.7
GTEX-NPJ8-0011-R1a-SM-33HCB 17.7
GTEX-11UD1-0011-R1b-SM-5BC7D 17.3
GTEX-13FHO-0011-R1b-SM-5KLZG 16.8
GTEX-13OW5-0011-R1b-SM-5L3GE 16.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 16.3
GTEX-13S7M-0011-R1b-SM-5PNZE 15.6
GTEX-11GSO-0011-R1b-SM-57WD3 15.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 14.3
GTEX-13OVL-0011-R1a-SM-5L3H5 13.7
GTEX-13JVG-0011-R1a-SM-5KM32 13.6
GTEX-11ONC-0011-R1a-SM-57WD4 13.5
GTEX-145LU-0011-R1a-SM-5Q5CE 13.2
GTEX-11ZTS-0011-R1a-SM-5BC71 12.9
GTEX-13PDP-0011-R1a-SM-5PNX5 12.7
GTEX-1212Z-0011-R1b-SM-5BC72 12.7
GTEX-132Q8-0011-R1a-SM-5EGLK 12.5
GTEX-13QJC-0011-R1b-SM-5S2UU 12.3
GTEX-XMD1-0011-R1A-SM-4AT4C 12.2
GTEX-13SLW-0011-R1a-SM-5S2W7 11.9
GTEX-YJ89-0011-R1a-SM-4RGLS 11.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 11.7
GTEX-139T8-0011-R1a-SM-5HL75 10.5
GTEX-13OW8-0011-R1a-SM-5L3HI 10.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 9.9
GTEX-12WSB-0011-R1b-SM-5P9EY 9.9
GTEX-ZF28-0011-R1a-SM-4WWD1 9.4
GTEX-ZVZQ-0011-R1a-SM-57WBU 8.8
GTEX-13NZA-0011-R1b-SM-5LUAF 8.7
GTEX-13CF2-0011-R1a-SM-5LZY1 8.7
GTEX-13FHP-0011-R1b-SM-5K7XL 8.5
GTEX-144GO-0011-R1a-SM-5PNWO 6.1
GTEX-ZE7O-0011-R1a-SM-57WDM 6.0
GTEX-13FTY-0011-R1a-SM-5LZXE 5.2
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

152.4

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 152.4
FF:10374-105G5 89 years, female 182.2
FF:10169-103B7 60 years, female 151.4
FF:10153-102I9 76 years, female 123.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.