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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:61.7TPM
GTEx:128.3RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA017369

 

Antibody CAB000023

 

Antibody CAB040544

 

Antibody CAB055506

 

Antibody CAB058688

 

Endothelial cells

Not detected   Not detected   Not detected   Not detected   Not detected  

Glial cells

Not detected   Not detected   Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Low   Medium   Not detected   Medium  

Neuropil

Not detected   Not detected   Not detected   Not detected   Not detected  
         
         
         

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

61.7

N/A Male, age 5
Sample 1
TPM: 65.7
overview Female, age 40
Sample 2
TPM: 27.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 92.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

128.3

GTEx sample id

RPKM

80.1105.5138.72.7208.9020406080100120140160180200220240260280
 
80.1105.5138.72.7208.9020406080100120140160180200220240260280

Brain - Cortex

Brain - Cortex
RPKM: 110.0
Samples: 114

Max RPKM: 298.7
Min RPKM: 2.7
Std RPKM: 45.5
Median RPKM: 105.6
GTEX-X585-3026-SM-46MWF 298.7
GTEX-117XS-3026-SM-5N9CA 208.9
GTEX-13NYS-3126-SM-5KLYV 200.4
GTEX-13SLX-3126-SM-5S2Q5 193.2
GTEX-13O3O-3126-SM-5KM3H 190.0
GTEX-145LS-3126-SM-5Q5BY 184.7
GTEX-11ONC-2926-SM-5P9JM 177.4
GTEX-11DXY-3226-SM-5GIDE 173.8
GTEX-X4XX-3026-SM-3NMB2 172.7
GTEX-11O72-2926-SM-5BC4V 168.3
GTEX-13OW8-2826-SM-5L3GC 167.8
GTEX-13OVH-3026-SM-5MR4N 161.6
GTEX-12WSC-3026-SM-5GCNF 161.2
GTEX-132Q8-3026-SM-5PNVG 161.0
GTEX-TSE9-3026-SM-3DB76 160.5
GTEX-ZYFD-3026-SM-5E44C 160.0
GTEX-XOTO-3026-SM-4B65M 155.6
GTEX-14BMV-3026-SM-5S2PQ 151.2
GTEX-T5JC-2426-SM-3NMDB 149.8
GTEX-WL46-2926-SM-3LK82 149.0
GTEX-T6MN-2626-SM-32PMQ 145.5
GTEX-1128S-2726-SM-5H12C 144.2
GTEX-ZZPT-3026-SM-5GZXH 143.4
GTEX-1313W-3126-SM-5LZUI 143.2
GTEX-Z93S-2926-SM-57WB9 141.3
GTEX-14ASI-3026-SM-5S2PN 139.8
GTEX-WWYW-3126-SM-3NB39 139.3
GTEX-145MF-2726-SM-5O995 139.1
GTEX-XLM4-3026-SM-4AT6L 138.8
GTEX-12ZZX-2926-SM-5GCOQ 138.5
GTEX-WVLH-3026-SM-3MJG9 136.8
GTEX-13VXU-2926-SM-5LU5C 136.4
GTEX-11OC5-0726-SM-5P9JK 134.9
GTEX-12126-1026-SM-5P9JJ 133.2
GTEX-QVJO-1426-SM-2S1QY 132.8
GTEX-11ZUS-2926-SM-5FQSL 132.2
GTEX-11WQK-3026-SM-5EQL6 130.7
GTEX-145MH-3026-SM-5Q5DZ 130.0
GTEX-11PRG-2926-SM-5987A 129.8
GTEX-WHSE-3026-SM-3P5ZH 129.8
GTEX-145MG-3026-SM-5RQJA 129.5
GTEX-13FHO-3026-SM-5J1O9 129.2
GTEX-13PL6-3126-SM-5LUAR 125.4
GTEX-YJ89-3026-SM-5IFJI 125.4
GTEX-YFC4-3126-SM-5PNV6 125.2
GTEX-13OW6-3026-SM-5J2MI 123.8
GTEX-ZVT3-3026-SM-5E43N 122.8
GTEX-Y8DK-0826-SM-4TT3T 121.2
GTEX-11GSO-2926-SM-5HL73 118.6
GTEX-12ZZY-3026-SM-5GCOU 115.2
GTEX-13FXS-3126-SM-5J2NN 114.4
GTEX-1399T-3026-SM-5KLZC 113.8
GTEX-13NYC-2826-SM-5K7WR 111.6
GTEX-13FLW-1426-SM-5K7YE 109.0
GTEX-13O3Q-2926-SM-5KM45 109.0
GTEX-RU72-3026-SM-5SI7Y 108.7
GTEX-ZUA1-3026-SM-59HJC 105.6
GTEX-Y111-2726-SM-4TT3N 105.5
GTEX-ZAK1-3026-SM-5S2MJ 105.5
GTEX-11DXW-1126-SM-5H12Q 105.2
GTEX-1192X-3126-SM-5N9BY 104.0
GTEX-12ZZZ-3026-SM-5BC67 103.7
GTEX-13S7M-3126-SM-5RQJQ 103.7
GTEX-PVOW-2526-SM-2XCF7 103.1
GTEX-14A5I-2926-SM-5Q5CQ 102.2
GTEX-12ZZW-2926-SM-5LZUP 102.0
GTEX-12WSH-3026-SM-5CVNI 100.5
GTEX-13QIC-2926-SM-5J2NF 100.1
GTEX-131YS-3126-SM-5KLYT 99.7
GTEX-RNOR-2326-SM-2TF4I 99.3
GTEX-11NUK-2926-SM-5A5MD 98.3
GTEX-R55F-1326-SM-5S2V4 97.4
GTEX-13NYB-3026-SM-5IJD7 95.6
GTEX-11GS4-3126-SM-5A5LH 94.0
GTEX-Q2AG-2926-SM-2HMJ3 90.1
GTEX-13FHP-3026-SM-5IJBS 90.0
GTEX-WZTO-2926-SM-3NM9I 90.0
GTEX-QVUS-2826-SM-3GADB 89.9
GTEX-111FC-3126-SM-5GZZ2 88.5
GTEX-UTHO-3026-SM-3GAFB 86.5
GTEX-144GL-3026-SM-5Q5CW 86.1
GTEX-13JVG-3126-SM-5L3FH 85.8
GTEX-11EMC-3226-SM-5EGKW 82.1
GTEX-NPJ8-1526-SM-2D7VU 80.3
GTEX-T2IS-3026-SM-32QPM 80.3
GTEX-11EI6-3026-SM-5GZZO 80.1
GTEX-ZAJG-3126-SM-5HL9J 79.0
GTEX-1117F-3226-SM-5N9CT 78.6
GTEX-QMR6-1426-SM-32PLA 77.0
GTEX-13PVQ-3026-SM-5SI93 74.9
GTEX-13X6J-3026-SM-5Q5CU 73.2
GTEX-13OW7-3026-SM-5L3GY 71.4
GTEX-OXRN-2426-SM-2I5EQ 69.6
GTEX-N7MT-1126-SM-5SI7V 69.1
GTEX-144FL-3026-SM-5O99C 68.6
GTEX-139T8-1026-SM-5J2MC 63.5
GTEX-13OVJ-2826-SM-5L3GW 61.2
GTEX-12WSD-3126-SM-5HL7P 57.1
GTEX-13IVO-2926-SM-5L3CZ 53.8
GTEX-11GSP-3226-SM-5986O 53.1
GTEX-QDT8-2926-SM-32PKC 52.2
GTEX-131XW-3126-SM-5LZUC 49.3
GTEX-11TTK-2926-SM-5PNYP 47.7
GTEX-ZE7O-3126-SM-5HL5X 47.7
GTEX-13JUV-2926-SM-5LZX7 45.0
GTEX-NPJ7-2726-SM-2I3FT 44.8
GTEX-12WSA-2926-SM-5EQ4D 40.6
GTEX-13X6K-2926-SM-5Q5D5 38.4
GTEX-PWO3-0926-SM-2I5EY 37.6
GTEX-13G51-3026-SM-5IJB8 36.1
GTEX-147GR-3026-SM-5S2ML 35.4
GTEX-11NV4-2126-SM-5N9DS 31.9
GTEX-1445S-3026-SM-5O9BR 31.8
GTEX-11OF3-2926-SM-5HL78 2.7
Show all
81.6147.1193.422.2336.0050100150200250300350
 
81.6147.1193.422.2336.0050100150200250300350

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 147.6
Samples: 108

Max RPKM: 364.3
Min RPKM: 22.2
Std RPKM: 76.9
Median RPKM: 147.1
GTEX-X585-0011-R10A-SM-46MUY 364.3
GTEX-X4XX-0011-R10B-SM-46MWO 336.0
GTEX-13NYS-0011-R10a-SM-5MR4S 327.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 315.1
GTEX-13N1W-0011-R10b-SM-5MR4H 292.5
GTEX-13O3O-0011-R10a-SM-5LUA9 290.7
GTEX-13CZV-0011-R10b-SM-5LZYD 290.5
GTEX-13SLX-0011-R10a-SM-5P9HV 286.9
GTEX-13QJC-0011-R10a-SM-5SI63 276.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 263.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 255.9
GTEX-NL3H-0011-R10A-SM-2I3E9 246.6
GTEX-13OW7-0011-R10a-SM-5L3H3 244.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 229.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 223.8
GTEX-13S7M-0011-R10b-SM-5PNZB 223.2
GTEX-14BIN-0011-R10a-SM-5S2UA 222.6
GTEX-145MG-0011-R10a-SM-5PNWG 222.5
GTEX-12WSE-0011-R10b-SM-5P9JV 221.6
GTEX-T6MN-0011-R10A-SM-32QP7 217.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 208.4
GTEX-145LS-0011-R10a-SM-5PNUQ 204.9
GTEX-11H98-0011-R10b-SM-5NQ98 203.7
GTEX-12WSC-0011-R10a-SM-5GU57 199.5
GTEX-13QIC-0011-R10a-SM-5O9C7 198.8
GTEX-12WSF-0011-R10a-SM-5LZVH 195.3
GTEX-ZF28-0011-R10a-SM-4WWEH 195.3
GTEX-145MH-0011-R10b-SM-5PNUK 192.8
GTEX-13X6I-0011-R10a-SM-5PNWI 188.9
GTEX-13O3Q-0011-R10b-SM-5KM39 186.1
GTEX-XLM4-0011-R10A-SM-4AT5P 184.4
GTEX-13FXS-0011-R10a-SM-5J2MA 180.3
GTEX-WL46-0011-R10A-SM-3MJFQ 179.8
GTEX-1313W-0011-R10b-SM-5DUXA 178.7
GTEX-13X6K-0011-R10a-SM-5P9JR 177.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 176.3
GTEX-131XH-0011-R10a-SM-5EGLJ 173.9
GTEX-N7MT-0011-R10A-SM-2I3E1 173.8
GTEX-13X6J-0011-R10b-SM-5PNWA 171.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 168.3
GTEX-12WSH-0011-R10a-SM-5LZUS 167.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 166.6
GTEX-WZTO-0011-R10B-SM-4E3KB 161.4
GTEX-S7SE-0011-R10A-SM-2XCDF 160.1
GTEX-N7MS-0011-R10A-SM-2HMJK 159.4
GTEX-13FLW-0011-R10b-SM-5LZZF 159.1
GTEX-WVLH-0011-R10A-SM-3MJFM 157.2
GTEX-131YS-0011-R10b-SM-5EQ5N 155.5
GTEX-13NYB-0011-R10a-SM-5KM43 154.6
GTEX-147GR-0011-R10b-SM-5S2UM 153.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 153.2
GTEX-WWYW-0011-R10A-SM-3NB35 153.1
GTEX-145LU-0011-R10a-SM-5PNWJ 149.8
GTEX-T5JC-0011-R10A-SM-32PM2 147.6
GTEX-YFC4-0011-R10a-SM-4SOK5 146.5
GTEX-13FHO-0011-R10b-SM-5J2MM 141.4
GTEX-14BIL-0011-R10a-SM-5SI75 140.8
GTEX-13OW6-0011-R10a-SM-5L3HE 138.6
GTEX-ZVZQ-0011-R10b-SM-51MRT 138.5
GTEX-12WSM-0011-R10a-SM-5DUWV 135.7
GTEX-YJ89-0011-R10a-SM-4SOK9 135.2
GTEX-13G51-0011-R10b-SM-5LZYF 135.0
GTEX-13FLV-0011-R10b-SM-5LZZ2 128.9
GTEX-13FTZ-0011-R10b-SM-5KLZS 127.4
GTEX-TSE9-0011-R10A-SM-3DB7O 125.2
GTEX-13OVL-0011-R10a-SM-5L3GS 123.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 121.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 116.1
GTEX-147F4-0011-R10b-SM-5S2WC 115.8
GTEX-ZDXO-0011-R10a-SM-4WWD8 115.7
GTEX-RVPU-0011-R10A-SM-2XCAH 115.5
GTEX-13OW8-0011-R10a-SM-5L3H6 114.5
GTEX-13SLW-0011-R10a-SM-5S2UI 113.1
GTEX-QVUS-0011-R10A-SM-3GIK3 109.9
GTEX-X4EP-0011-R10B-SM-4QASJ 109.5
GTEX-X261-0011-R10B-SM-4E3JT 106.6
GTEX-11WQK-0011-R10a-SM-5BC6R 105.2
GTEX-QMR6-0011-R10A-SM-32PKO 97.5
GTEX-ZVT3-0011-R10b-SM-57WB6 96.1
GTEX-OXRN-0011-R10A-SM-2I5GC 86.8
GTEX-ZUA1-0011-R10a-SM-51MT6 82.3
GTEX-12126-0011-R10b-SM-5BC6T 79.4
GTEX-Z93S-0011-R10a-SM-4RGNM 79.3
GTEX-P44H-0011-R10A-SM-2XCEK 78.8
GTEX-13JUV-0011-R10b-SM-5LZXR 73.6
GTEX-11WQC-0011-R10a-SM-57WCT 72.6
GTEX-12ZZW-0011-R10b-SM-5HL9X 70.5
GTEX-12WSA-0011-R10b-SM-5P9ET 69.6
GTEX-ZXG5-0011-R10a-SM-57WDD 68.2
GTEX-QDT8-0011-R10A-SM-32PKG 68.0
GTEX-13IVO-0011-R10a-SM-5LZY3 63.8
GTEX-13NZA-0011-R10b-SM-5KM54 63.1
GTEX-14753-0011-R10b-SM-5S2WE 57.2
GTEX-12WSD-0011-R10b-SM-5GU79 53.7
GTEX-XMD1-0011-R10A-SM-4AT4A 50.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 48.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 47.4
GTEX-1477Z-0011-R10b-SM-5S2RF 47.3
GTEX-11ZUS-0011-R10b-SM-5BC79 47.0
GTEX-NL4W-0011-R10A-SM-2I3DY 45.4
GTEX-13N2G-0011-R10a-SM-5MR34 40.0
GTEX-OXRO-0011-R10A-SM-2I5EH 38.4
GTEX-131XW-0011-R10a-SM-5DUVA 35.8
GTEX-139TS-0011-R10a-SM-5K7TU 33.6
GTEX-13JVG-0011-R10b-SM-5KM2P 31.8
GTEX-ZV68-0011-R10a-SM-51MT7 23.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 22.3
GTEX-1445S-0011-R10a-SM-5PNWB 22.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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