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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:282.4TPM
GTEx:77.8RPKM
FANTOM5:918.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA051162

 

Antibody HPA053502

 

Antibody CAB018734

 

Glandular cells

High   High   High  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

282.4

overview Male, age 65
Sample 1
TPM: 374.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 296.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 262.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 196.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

77.8

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 77.8
Samples: 88

Max RPKM: 307
Min RPKM: 3.2
Std RPKM: 65.6
Median RPKM: 65.7
GTEX-ZYFG-2026-SM-5E43Y 307.0
GTEX-YB5E-1526-SM-5IFIE 259.3
GTEX-XUZC-1426-SM-4BRV3 217.4
GTEX-YEC4-1726-SM-4W21E 206.2
GTEX-ZLV1-1126-SM-4WWBW 198.3
GTEX-Y9LG-1626-SM-5IFHM 188.4
GTEX-13D11-0726-SM-5LZZB 181.5
GTEX-145LT-1026-SM-5LU9O 179.1
GTEX-131XF-1326-SM-5GCMQ 167.4
GTEX-YF7O-1826-SM-5IFIU 157.6
GTEX-1122O-1326-SM-5H11F 156.6
GTEX-XGQ4-1326-SM-4GIDU 156.2
GTEX-13113-1226-SM-5EGHT 155.3
GTEX-111YS-1426-SM-5GID8 153.7
GTEX-ZTSS-0926-SM-59865 151.8
GTEX-ZPCL-1726-SM-57WEO 149.2
GTEX-X5EB-1626-SM-4E3IV 148.6
GTEX-ZXES-1526-SM-5NQ95 147.7
GTEX-ZVZP-1826-SM-5GZXB 144.8
GTEX-11EQ9-1326-SM-5985X 139.8
GTEX-ZZ64-0526-SM-5GZXM 130.5
GTEX-14DAR-1426-SM-5RQIR 127.6
GTEX-14E6E-1626-SM-5RQI7 121.1
GTEX-11I78-1126-SM-5A5K5 119.5
GTEX-VJYA-0926-SM-4KL1N 109.8
GTEX-13PL7-2626-SM-5IFH4 105.9
GTEX-133LE-1426-SM-5IFH1 94.8
GTEX-ZA64-1226-SM-5HL7B 93.5
GTEX-11P7K-1626-SM-5GU63 92.9
GTEX-11DXX-1626-SM-5H11H 90.4
GTEX-11DXZ-1326-SM-5H11X 85.5
GTEX-ZTX8-0526-SM-59HLD 81.5
GTEX-ZLFU-1526-SM-4WWBT 80.1
GTEX-13O61-1326-SM-5KM31 79.8
GTEX-1399S-2026-SM-5KM4B 76.3
GTEX-WQUQ-2426-SM-4MVNW 73.7
GTEX-ZYWO-1526-SM-5SIAL 73.3
GTEX-ZEX8-1826-SM-57WBH 72.0
GTEX-XBED-1426-SM-4AT4G 71.6
GTEX-13FH7-1226-SM-5IJFK 70.0
GTEX-ZTPG-2626-SM-57WFX 69.9
GTEX-XXEK-1026-SM-4BRUW 68.5
GTEX-11P82-0826-SM-5P9GU 68.0
GTEX-Y114-1426-SM-4TT6W 67.2
GTEX-13FTW-2026-SM-5IJE2 64.2
GTEX-12BJ1-1926-SM-5HL9Z 53.7
GTEX-13CF3-1226-SM-5LZXN 53.0
GTEX-WFG7-1726-SM-4LVME 52.0
GTEX-WH7G-1626-SM-4LVMY 51.9
GTEX-1399R-2026-SM-5K7WN 51.4
GTEX-139T6-1026-SM-5IJGC 50.7
GTEX-139YR-2226-SM-5IFFW 46.6
GTEX-WFJO-0926-SM-4LVM2 44.1
GTEX-11NSD-1726-SM-5N9C3 43.7
GTEX-11XUK-1426-SM-5EQMG 40.6
GTEX-13RTK-0826-SM-5Q5C6 40.4
GTEX-XAJ8-0526-SM-47JYK 37.3
GTEX-ZVP2-1726-SM-5GU5P 37.3
GTEX-ZPIC-2326-SM-57WDW 34.4
GTEX-11VI4-1626-SM-5EQKO 33.4
GTEX-Y3IK-1726-SM-4YCCR 30.8
GTEX-WRHK-1026-SM-4MVOD 30.4
GTEX-ZVT2-2126-SM-5NQ93 28.3
GTEX-Y5LM-1626-SM-4VDTB 26.9
GTEX-1399U-2126-SM-5IFEZ 26.7
GTEX-Z9EW-0926-SM-5CVMM 26.4
GTEX-WFG8-1626-SM-4LVMB 24.6
GTEX-13O21-1026-SM-5IJDU 23.6
GTEX-X15G-1426-SM-4PQZK 20.2
GTEX-ZP4G-1626-SM-57WGD 20.1
GTEX-13QBU-1926-SM-5IJEW 15.7
GTEX-13OVI-1926-SM-5IJCG 14.9
GTEX-145ME-0926-SM-5O9AR 14.8
GTEX-131XG-1726-SM-5LZUR 13.7
GTEX-12WSK-1526-SM-5CVNO 13.4
GTEX-148VJ-2226-SM-5NQ9M 9.5
GTEX-ZQG8-2526-SM-57WEQ 9.2
GTEX-UPK5-2026-SM-4JBIM 8.9
GTEX-111CU-1326-SM-5NQ8L 8.9
GTEX-ZQUD-0926-SM-57WE3 7.7
GTEX-13111-1426-SM-5DUW3 7.7
GTEX-ZF2S-1726-SM-57WFT 6.1
GTEX-VUSG-1726-SM-4KKZL 6.1
GTEX-XMK1-1826-SM-4B66F 6.0
GTEX-WEY5-1526-SM-4LMJF 5.2
GTEX-117YX-0326-SM-5GICL 5.0
GTEX-ZC5H-2326-SM-4WAYT 4.7
GTEX-1192X-2526-SM-59868 3.2
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

918.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 918.2
FF:10024-101D6 15,40,85 years, mixed 918.2

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