We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CST3
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:445.7TPM
GTEx:215.0RPKM
FANTOM5:1186.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:Not detected
 
 

Antibody staining

Antibody HPA013143

 

Antibody CAB000118

 

Adipocytes

Not detected  

Glandular cells

Medium   Low  

Myoepithelial cells

Not detected   Not detected  
      
   
   

BREAST - HPA RNA-seq

Average TPM

445.7

overview Female, age 52
Sample 1
TPM: 545.8
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 837.6
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 323.5
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 76.0
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

215.0

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 215.0
Samples: 214

Max RPKM: 519.6
Min RPKM: 58.9
Std RPKM: 81.2
Median RPKM: 203.3
GTEX-145MN-1926-SM-5SIAI 519.6
GTEX-14ABY-2126-SM-5QGQZ 514.4
GTEX-132NY-0826-SM-5K7Y7 424.8
GTEX-YFCO-1826-SM-4W1YH 390.2
GTEX-XYKS-1326-SM-4BRUN 384.8
GTEX-ZDTT-2126-SM-5S2OJ 381.6
GTEX-X4XY-0926-SM-4E3JD 375.2
GTEX-139T6-1626-SM-5PNYZ 371.2
GTEX-ZLV1-1426-SM-4WWES 370.7
GTEX-13S86-1226-SM-5S2OA 365.7
GTEX-139TU-0626-SM-5KM3X 360.1
GTEX-145LT-0726-SM-5S2VM 357.2
GTEX-XUJ4-1926-SM-4BOOV 345.4
GTEX-ZTX8-1226-SM-4YCE9 344.8
GTEX-ZZPU-0626-SM-5E43T 340.5
GTEX-11NSD-0926-SM-5N9DR 339.7
GTEX-R55D-0826-SM-48FEA 338.4
GTEX-1122O-1226-SM-5H113 334.6
GTEX-XBED-1626-SM-47JYN 333.4
GTEX-14753-2426-SM-5LU8U 331.6
GTEX-13FTW-1426-SM-5LZWZ 331.4
GTEX-11P7K-0726-SM-5EGKX 328.3
GTEX-ZVT4-1026-SM-57WC4 327.9
GTEX-12WSK-2226-SM-5GCO5 326.2
GTEX-13D11-1026-SM-5IJFB 324.9
GTEX-13FTX-1126-SM-5N9EN 324.7
GTEX-13NZB-2126-SM-5MR4Y 323.9
GTEX-ZQUD-1926-SM-51MSA 322.9
GTEX-XQ8I-2426-SM-4WAXY 320.4
GTEX-ZYFC-0826-SM-5E44K 319.9
GTEX-11TT1-2126-SM-5GU5Y 317.2
GTEX-ZA64-1526-SM-5CVMD 316.5
GTEX-ZEX8-2226-SM-57WC6 313.8
GTEX-11ZUS-0826-SM-5FQUY 309.4
GTEX-S341-1526-SM-4AD6K 306.9
GTEX-13N1W-0626-SM-5MR4U 306.4
GTEX-YEC3-1026-SM-5IFI5 306.3
GTEX-11ZTT-2326-SM-5EQLG 295.6
GTEX-S33H-0326-SM-4AD6N 295.3
GTEX-11NV4-2026-SM-5N9DG 292.9
GTEX-12BJ1-1826-SM-5HL9N 287.4
GTEX-XV7Q-2326-SM-4BRVZ 286.3
GTEX-ZV6S-1826-SM-5NQ8D 284.2
GTEX-11EQ9-1826-SM-5Q5AJ 283.8
GTEX-13O61-1826-SM-5KM4I 278.6
GTEX-U8XE-0826-SM-4E3J1 277.7
GTEX-RWS6-1926-SM-47JXY 273.3
GTEX-12WSM-1726-SM-5BC6J 272.1
GTEX-Y5V6-2126-SM-4WWFX 267.9
GTEX-11EI6-0626-SM-5985T 266.0
GTEX-S7SE-0826-SM-4AT4D 265.6
GTEX-ZVZQ-0826-SM-51MRF 263.5
GTEX-13O3O-0826-SM-5K7WE 258.4
GTEX-11GS4-2126-SM-5A5KR 256.2
GTEX-11OF3-1926-SM-59889 256.1
GTEX-11EM3-1326-SM-5N9C6 256.0
GTEX-13NZ9-1026-SM-5MR5K 254.7
GTEX-Y3I4-1526-SM-4TT7K 254.7
GTEX-13O3Q-2226-SM-5KM4O 254.4
GTEX-13NZ8-0126-SM-5IJCT 253.1
GTEX-Y8E4-1626-SM-5S2MW 252.7
GTEX-ZDXO-0126-SM-5S2ND 248.5
GTEX-U412-1826-SM-4DXTJ 248.1
GTEX-11I78-2226-SM-5PNYA 245.8
GTEX-ZTTD-1026-SM-51MRD 244.1
GTEX-Y114-2026-SM-4TT7L 243.8
GTEX-VUSG-2226-SM-4KKZO 243.7
GTEX-ZYWO-2326-SM-5GZY4 242.9
GTEX-ZDYS-1126-SM-5K7UB 242.6
GTEX-1313W-0826-SM-5EQ4T 241.5
GTEX-WY7C-2726-SM-3NB3P 239.9
GTEX-132AR-0826-SM-5EGK6 238.3
GTEX-ZVTK-0326-SM-51MRR 238.3
GTEX-S32W-2026-SM-4AD6E 237.1
GTEX-ZT9W-2026-SM-51MRA 236.9
GTEX-11ONC-2126-SM-5HL6E 234.4
GTEX-WXYG-2226-SM-4E3IM 234.0
GTEX-11LCK-2426-SM-5HL5F 233.4
GTEX-XGQ4-0926-SM-4AT4U 232.7
GTEX-14E6E-1326-SM-5S2NR 230.7
GTEX-WYBS-0926-SM-3NM94 229.5
GTEX-XMD2-0926-SM-4WWEF 226.9
GTEX-ZLFU-2126-SM-4WWEV 225.7
GTEX-ZY6K-1626-SM-5GZWV 225.6
GTEX-T5JW-2026-SM-4DM63 225.3
GTEX-11WQC-1726-SM-5GU4W 222.5
GTEX-S4P3-1326-SM-4AD6V 221.6
GTEX-WI4N-1426-SM-3LK7H 220.6
GTEX-ZQG8-0726-SM-5P9H9 220.3
GTEX-11P82-1326-SM-5HL62 217.8
GTEX-QVJO-1826-SM-447C9 217.1
GTEX-XQ3S-1326-SM-4BOPQ 216.5
GTEX-WYJK-1326-SM-3NB2T 216.4
GTEX-11DXW-0626-SM-5N9ER 216.1
GTEX-S4Q7-1126-SM-4AD6R 214.4
GTEX-ZU9S-1926-SM-5NQBP 213.3
GTEX-13FHO-0826-SM-5L3E8 213.1
GTEX-147F4-2826-SM-5NQBN 211.7
GTEX-144GL-2026-SM-5LU3O 211.2
GTEX-11O72-2126-SM-5N9FO 209.0
GTEX-UPK5-2326-SM-3P5Z8 208.7
GTEX-14AS3-1626-SM-5S2OY 206.5
GTEX-SE5C-2126-SM-4BRUJ 205.9
GTEX-ZV7C-1826-SM-5NQ83 205.7
GTEX-13W46-0826-SM-5LU3H 205.6
GTEX-13PVQ-1026-SM-5KM3M 205.0
GTEX-13W3W-1226-SM-5LU4H 203.8
GTEX-YB5E-1726-SM-5IFJ3 202.9
GTEX-12WSN-1326-SM-5GCNT 200.8
GTEX-11DXZ-1926-SM-5GZZL 200.6
GTEX-ZPIC-1126-SM-5BC7F 200.3
GTEX-PSDG-1626-SM-48TCQ 200.0
GTEX-117YX-1426-SM-5H12H 198.9
GTEX-Y5V5-2126-SM-4WWFO 197.8
GTEX-13N11-1726-SM-5J1OJ 197.0
GTEX-ZAB4-2526-SM-5HL8M 196.0
GTEX-TKQ1-0226-SM-33HB5 195.1
GTEX-11GSO-1926-SM-5A5K3 195.0
GTEX-ZZ64-1226-SM-5E43R 193.6
GTEX-YB5K-1626-SM-5IFIN 192.8
GTEX-XMK1-1126-SM-4IHJ8 191.8
GTEX-133LE-1726-SM-5K7VQ 191.4
GTEX-1211K-1926-SM-5EQLB 189.4
GTEX-T6MN-0726-SM-32PML 188.7
GTEX-11PRG-0826-SM-5EQ6A 186.9
GTEX-XUW1-2326-SM-4BOO5 184.4
GTEX-11DXY-2326-SM-5GICW 183.6
GTEX-U3ZN-1926-SM-4DXSG 183.4
GTEX-13113-1726-SM-5GCOO 183.3
GTEX-Y9LG-1426-SM-5IFJZ 182.3
GTEX-X15G-1626-SM-3NMB3 181.9
GTEX-UJHI-1426-SM-3DB9C 181.3
GTEX-Q2AG-0326-SM-48U1O 180.0
GTEX-ZVT2-1826-SM-5NQ8W 179.9
GTEX-YJ8O-2226-SM-5IFHW 179.6
GTEX-Y8LW-1626-SM-5IFHX 178.1
GTEX-YFC4-1426-SM-5IFJG 178.1
GTEX-11TUW-1826-SM-5BC5D 176.8
GTEX-ZWKS-2826-SM-5NQ74 176.7
GTEX-WRHU-0326-SM-3MJFY 176.1
GTEX-ZUA1-1526-SM-59HLS 173.3
GTEX-11EMC-2026-SM-5A5JV 173.0
GTEX-ZYW4-0826-SM-5GIDG 173.0
GTEX-13OW8-0226-SM-5K7UP 172.8
GTEX-U3ZH-1426-SM-4DXSR 172.8
GTEX-Y5LM-1726-SM-4VDSX 172.8
GTEX-WFON-1826-SM-3GILG 172.7
GTEX-R53T-1526-SM-48FEK 170.9
GTEX-Y111-2026-SM-4SOJA 170.6
GTEX-XMD1-0826-SM-4AT52 170.1
GTEX-117XS-1926-SM-5GICO 169.4
GTEX-13CF2-2026-SM-5K7VI 168.6
GTEX-146FH-0826-SM-5SI8T 167.6
GTEX-SIU7-1626-SM-4BRUK 166.9
GTEX-13CF3-2126-SM-5IFJP 163.2
GTEX-X261-0626-SM-3NMD9 163.1
GTEX-ZYT6-0126-SM-5E45J 161.3
GTEX-QMRM-1626-SM-4R1KV 158.1
GTEX-R55F-1726-SM-2TF4R 158.1
GTEX-1192X-2326-SM-5987X 157.5
GTEX-145MO-0826-SM-5NQBL 157.4
GTEX-X4EP-2926-SM-3P5YQ 156.7
GTEX-1399U-1826-SM-5PNZ1 155.4
GTEX-1314G-1226-SM-5BC6D 154.9
GTEX-ZF29-1926-SM-5S2P1 154.1
GTEX-12WSB-0626-SM-59HJO 153.8
GTEX-ZF2S-2026-SM-5E461 152.9
GTEX-R3RS-0626-SM-48FE1 152.4
GTEX-T2YK-2226-SM-32QPT 151.0
GTEX-12KS4-0126-SM-5Q5A5 148.1
GTEX-T5JC-2126-SM-32PMO 146.4
GTEX-QEG5-0726-SM-4R1JQ 145.1
GTEX-13OW5-2226-SM-5L3HC 143.7
GTEX-13FTY-2226-SM-5J1ND 140.1
GTEX-RUSQ-2026-SM-4GIAK 138.9
GTEX-QEL4-2126-SM-447AE 138.2
GTEX-Y3IK-2326-SM-4WWDT 137.3
GTEX-ZAJG-0626-SM-5HL8X 135.9
GTEX-13O3P-0826-SM-5L3DH 134.5
GTEX-1269C-2426-SM-5FQSN 133.1
GTEX-145ME-1526-SM-5Q5F2 132.3
GTEX-RU72-0626-SM-46MUI 132.3
GTEX-XOT4-0726-SM-4GIAW 132.3
GTEX-QDT8-0626-SM-48TYW 128.4
GTEX-TMMY-0726-SM-33HBE 127.4
GTEX-131YS-0626-SM-5EGKL 126.1
GTEX-ZF3C-2326-SM-5S2MZ 126.0
GTEX-ZXES-0826-SM-5E43C 125.4
GTEX-144GM-0926-SM-5O994 125.0
GTEX-1117F-2826-SM-5GZXL 123.9
GTEX-11P81-1926-SM-5BC53 122.5
GTEX-TKQ2-1826-SM-33HB2 121.2
GTEX-VJWN-0726-SM-3GIJ8 118.9
GTEX-11DZ1-0326-SM-5N9BN 117.9
GTEX-XUZC-1626-SM-4BRVP 115.8
GTEX-S4UY-0726-SM-4AD6X 114.9
GTEX-13PL6-2926-SM-5L3I2 112.8
GTEX-11WQK-2426-SM-5GU5C 109.3
GTEX-WOFL-0826-SM-3MJG1 108.9
GTEX-111YS-1926-SM-5GICC 108.8
GTEX-REY6-2426-SM-48FF5 108.8
GTEX-13QIC-2326-SM-5LU5N 107.7
GTEX-T6MO-0326-SM-32QOK 107.0
GTEX-ZC5H-2626-SM-5J2MG 106.1
GTEX-TML8-1226-SM-32QON 105.6
GTEX-131XW-0726-SM-5EGK3 100.7
GTEX-WYVS-1726-SM-3NMAY 99.8
GTEX-139T8-0826-SM-5L3DE 97.6
GTEX-T2IS-1526-SM-32QPR 81.6
GTEX-ZVE2-1226-SM-5NQ8R 81.4
GTEX-12ZZX-1126-SM-5EGKB 73.8
GTEX-132Q8-1426-SM-5EGK7 71.5
GTEX-W5X1-2326-SM-3GIL6 68.2
GTEX-UTHO-1026-SM-3GAF7 58.9
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

1186.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 1186.9
FF:10080-102A8 77 years, female 1186.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.