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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:550.1RPKM
FANTOM5:2556.6Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Low
 

Antibody staining

Antibody HPA013143

 

Antibody CAB000118

 

Glial cells

Medium   Medium  

Neuronal cells

Not detected   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

550.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 550.1
Samples: 117

Max RPKM: 1473.6
Min RPKM: 126.1
Std RPKM: 231.6
Median RPKM: 521
GTEX-13OVJ-0011-R5a-SM-5P9H7 1473.6
GTEX-139T8-0011-R5b-SM-5J1MO 1373.8
GTEX-13JVG-0011-R5a-SM-5MR4O 1154.3
GTEX-13NYB-0011-R5a-SM-5MR45 1135.9
GTEX-13FLV-0011-R5a-SM-5LZWT 1135.6
GTEX-11H98-0011-R5b-SM-57WCF 1007.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 961.7
GTEX-1445S-0011-R5a-SM-5PNUS 903.3
GTEX-12WSA-0011-R5b-SM-5GU5I 900.5
GTEX-XOTO-0011-R5A-SM-4B657 852.3
GTEX-X261-0011-R5A-SM-3NMB4 847.9
GTEX-ZV68-0011-R5a-SM-4YCDW 833.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 795.1
GTEX-13OW7-0011-R5b-SM-5O9DM 790.3
GTEX-12ZZX-0011-R5a-SM-5HL89 782.4
GTEX-13FLW-0011-R5a-SM-5LZX6 773.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 764.4
GTEX-13CIG-0011-R5b-SM-5L3F2 753.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 738.4
GTEX-144GL-0011-R5b-SM-5PNUJ 735.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 724.5
GTEX-139TT-0011-R5b-SM-5K7W8 719.2
GTEX-R55E-0011-R5A-SM-2TC5N 697.3
GTEX-13FXS-0011-R5b-SM-5LZYE 690.6
GTEX-13112-0011-R5b-SM-5DUV8 686.1
GTEX-13FHP-0011-R5b-SM-5LZY2 678.2
GTEX-WZTO-0011-R5B-SM-3NMC5 670.6
GTEX-ZUA1-0011-R5b-SM-51MTG 668.1
GTEX-13CZV-0011-R5a-SM-5K7XA 662.7
GTEX-NPJ7-0011-R5a-SM-33HBK 657.9
GTEX-12WSB-0011-R5b-SM-5GU67 646.9
GTEX-13NYS-0011-R5a-SM-5MR4D 633.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 632.1
GTEX-139TS-0011-R5b-SM-5J2MZ 628.3
GTEX-13OW6-0011-R5a-SM-5O9BK 614.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 613.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 612.6
GTEX-11UD1-0011-R5b-SM-5P9FP 605.7
GTEX-13SLX-0011-R5a-SM-5O9BV 601.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 597.9
GTEX-ZVT3-0011-R5a-SM-51MSI 596.2
GTEX-NL3H-0011-R5a-SM-2I3GB 585.5
GTEX-13OVL-0011-R5b-SM-5L3FU 583.6
GTEX-ZXG5-0011-R5b-SM-57WBN 572.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 570.2
GTEX-T6MN-0011-R5A-SM-32QPD 567.9
GTEX-13X6K-0011-R5b-SM-5PNUE 566.9
GTEX-14BIN-0011-R5b-SM-5SI78 564.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 563.0
GTEX-145MG-0011-R5b-SM-5S2VU 562.7
GTEX-14ABY-0011-R5b-SM-5SI7B 558.8
GTEX-WVLH-0011-R5A-SM-3MJFW 554.0
GTEX-YJ89-0011-R5a-SM-4V6GM 545.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 542.2
GTEX-13OW5-0011-R5b-SM-5L3FR 539.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 530.2
GTEX-T5JC-0011-R5A-SM-32PLK 525.4
GTEX-13CF2-0011-R5a-SM-5LZWS 524.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 521.0
GTEX-132Q8-0011-R5a-SM-5IJDM 513.5
GTEX-13OVH-0011-R5b-SM-5KM4L 507.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 507.0
GTEX-YFC4-0011-R5a-SM-4RGLR 499.8
GTEX-ZE7O-0011-R5a-SM-57WBO 492.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 491.7
GTEX-TSE9-0011-R5A-SM-3DB7J 490.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 486.1
GTEX-13VXU-0011-R5a-SM-5O9D7 483.1
GTEX-N7MS-0011-R5a-SM-2HMK8 470.2
GTEX-NL4W-0011-R5a-SM-2I3GD 469.8
GTEX-144GO-0011-R5a-SM-5PNUR 468.8
GTEX-1313W-0011-R5b-SM-5L3EP 462.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 461.2
GTEX-11NV4-0011-R5a-SM-5NQ88 454.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 453.3
GTEX-S7SE-0011-R5A-SM-2XCDA 449.7
GTEX-11GSP-0011-R5a-SM-57WBE 433.0
GTEX-S7PM-0011-R5A-SM-3NM8G 431.6
GTEX-14BIM-0011-R5b-SM-5S2RM 426.4
GTEX-RU72-0011-R5A-SM-2TF6U 424.7
GTEX-13X6I-0011-R5a-SM-5PNWW 416.7
GTEX-145MH-0011-R5a-SM-5P9JT 415.6
GTEX-12WSC-0011-R5b-SM-5CVNS 415.1
GTEX-13JUV-0011-R5a-SM-5LZY5 412.7
GTEX-WWYW-0011-R5A-SM-3NB3E 411.9
GTEX-13NZA-0011-R5b-SM-5KM4K 409.5
GTEX-131YS-0011-R5b-SM-5K7YB 404.4
GTEX-11WQC-0011-R5a-SM-5BC74 402.5
GTEX-13O3O-0011-R5b-SM-5KM44 399.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 393.3
GTEX-RVPV-0011-R5A-SM-2TF69 389.1
GTEX-OXRN-0011-R5A-SM-2I5EF 388.2
GTEX-13G51-0011-R5a-SM-5L3EB 383.1
GTEX-12WSD-0011-R5b-SM-5CVNG 377.0
GTEX-12WSH-0011-R5b-SM-5P9F3 375.2
GTEX-1399T-0011-R5b-SM-5IJDK 365.0
GTEX-11OF3-0011-R5a-SM-57WB4 353.9
GTEX-12WSF-0011-R5a-SM-5HL8K 353.6
GTEX-13X6J-0011-R5b-SM-5PNWT 351.4
GTEX-N7MT-0011-R5a-SM-2I3G6 335.7
GTEX-X4XX-0011-R5A-SM-46MWN 322.2
GTEX-P44H-0011-R5A-SM-2XCEX 317.6
GTEX-QVJO-0011-R5A-SM-2S1QM 316.3
GTEX-145LS-0011-R5a-SM-5SI65 313.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 312.8
GTEX-QMR6-0011-R5A-SM-32PKT 309.9
GTEX-1477Z-0011-R5b-SM-5PNUO 293.5
GTEX-XMD1-0011-R5A-SM-4AT47 290.1
GTEX-13S7M-0011-R5b-SM-5P9HS 287.6
GTEX-OHPN-0011-R5A-SM-2I5FF 253.0
GTEX-PVOW-0011-R5A-SM-32PL7 237.1
GTEX-X585-0011-R5A-SM-46MVI 227.5
GTEX-WL46-0011-R5A-SM-3LK6V 227.4
GTEX-RVPU-0011-R5A-SM-2XCAD 219.6
GTEX-UTHO-0011-R5A-SM-3GIJD 190.1
GTEX-T2IS-0011-R5A-SM-32QP4 160.0
GTEX-Z93S-0011-R5b-SM-4RGNI 126.1
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

2556.6

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 2556.6
FF:10379-105H1 89 years, female 3314.8
FF:10164-103B2 76 years, female 1798.4

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