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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:1269.6TPM
GTEx:435.1RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Low
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA013143

 

Antibody CAB000118

 

Endothelial cells

Medium   High  

Glial cells

Medium   Low  

Neuronal cells

High   High  

Neuropil

Medium   Medium  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

1269.6

N/A Male, age 5
Sample 1
TPM: 2081.6
overview Female, age 40
Sample 2
TPM: 883.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 843.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

435.1

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 452.6
Samples: 114

Max RPKM: 1088
Min RPKM: 85.1
Std RPKM: 189.9
Median RPKM: 431.6
GTEX-11GSP-3226-SM-5986O 1088.0
GTEX-13OVJ-2826-SM-5L3GW 1056.7
GTEX-ZE7O-3126-SM-5HL5X 1043.7
GTEX-13OW7-3026-SM-5L3GY 935.1
GTEX-1445S-3026-SM-5O9BR 890.7
GTEX-11OC5-0726-SM-5P9JK 863.1
GTEX-12WSD-3126-SM-5HL7P 786.2
GTEX-1399T-3026-SM-5KLZC 777.7
GTEX-11EMC-3226-SM-5EGKW 701.0
GTEX-1192X-3126-SM-5N9BY 682.9
GTEX-139T8-1026-SM-5J2MC 676.8
GTEX-11TTK-2926-SM-5PNYP 675.4
GTEX-131XW-3126-SM-5LZUC 672.2
GTEX-13OW6-3026-SM-5J2MI 663.8
GTEX-13JVG-3126-SM-5L3FH 645.1
GTEX-12ZZZ-3026-SM-5BC67 643.9
GTEX-145MF-2726-SM-5O995 641.7
GTEX-144FL-3026-SM-5O99C 632.5
GTEX-1117F-3226-SM-5N9CT 616.6
GTEX-13JUV-2926-SM-5LZX7 600.9
GTEX-ZVT3-3026-SM-5E43N 578.0
GTEX-13PVQ-3026-SM-5SI93 573.9
GTEX-145MG-3026-SM-5RQJA 569.0
GTEX-11GSO-2926-SM-5HL73 543.1
GTEX-11ONC-2926-SM-5P9JM 536.6
GTEX-11NUK-2926-SM-5A5MD 534.1
GTEX-13FHO-3026-SM-5J1O9 529.0
GTEX-14ASI-3026-SM-5S2PN 526.4
GTEX-11NV4-2126-SM-5N9DS 525.8
GTEX-11EI6-3026-SM-5GZZO 525.7
GTEX-RU72-3026-SM-5SI7Y 525.1
GTEX-13OW8-2826-SM-5L3GC 523.1
GTEX-13X6K-2926-SM-5Q5D5 512.0
GTEX-13QIC-2926-SM-5J2NF 511.6
GTEX-YJ89-3026-SM-5IFJI 508.8
GTEX-13O3Q-2926-SM-5KM45 499.9
GTEX-13S7M-3126-SM-5RQJQ 498.5
GTEX-13O3O-3126-SM-5KM3H 497.2
GTEX-14BMV-3026-SM-5S2PQ 495.8
GTEX-11WQK-3026-SM-5EQL6 493.3
GTEX-WHSE-3026-SM-3P5ZH 490.7
GTEX-147GR-3026-SM-5S2ML 490.6
GTEX-144GL-3026-SM-5Q5CW 488.0
GTEX-QVUS-2826-SM-3GADB 483.9
GTEX-Y8DK-0826-SM-4TT3T 483.3
GTEX-11PRG-2926-SM-5987A 481.4
GTEX-13IVO-2926-SM-5L3CZ 480.3
GTEX-Y111-2726-SM-4TT3N 480.2
GTEX-13NYB-3026-SM-5IJD7 475.6
GTEX-12WSC-3026-SM-5GCNF 471.6
GTEX-12ZZW-2926-SM-5LZUP 463.1
GTEX-R55F-1326-SM-5S2V4 460.2
GTEX-Q2AG-2926-SM-2HMJ3 452.7
GTEX-12126-1026-SM-5P9JJ 449.9
GTEX-1128S-2726-SM-5H12C 435.8
GTEX-PWO3-0926-SM-2I5EY 433.7
GTEX-13SLX-3126-SM-5S2Q5 432.0
GTEX-XOTO-3026-SM-4B65M 431.1
GTEX-13X6J-3026-SM-5Q5CU 429.5
GTEX-11DXY-3226-SM-5GIDE 425.9
GTEX-13OVH-3026-SM-5MR4N 422.0
GTEX-YFC4-3126-SM-5PNV6 420.9
GTEX-11GS4-3126-SM-5A5LH 420.1
GTEX-11DXW-1126-SM-5H12Q 419.4
GTEX-14A5I-2926-SM-5Q5CQ 411.9
GTEX-WZTO-2926-SM-3NM9I 406.7
GTEX-131YS-3126-SM-5KLYT 402.2
GTEX-145LS-3126-SM-5Q5BY 397.4
GTEX-13FHP-3026-SM-5IJBS 396.1
GTEX-13FXS-3126-SM-5J2NN 394.1
GTEX-ZYFD-3026-SM-5E44C 389.3
GTEX-ZAK1-3026-SM-5S2MJ 381.9
GTEX-11O72-2926-SM-5BC4V 381.2
GTEX-13PL6-3126-SM-5LUAR 378.1
GTEX-13FLW-1426-SM-5K7YE 377.9
GTEX-12WSA-2926-SM-5EQ4D 373.5
GTEX-12WSH-3026-SM-5CVNI 369.0
GTEX-OXRN-2426-SM-2I5EQ 368.6
GTEX-12ZZX-2926-SM-5GCOQ 366.9
GTEX-T5JC-2426-SM-3NMDB 363.6
GTEX-12ZZY-3026-SM-5GCOU 354.6
GTEX-XLM4-3026-SM-4AT6L 350.2
GTEX-13NYC-2826-SM-5K7WR 341.9
GTEX-132Q8-3026-SM-5PNVG 341.6
GTEX-ZUA1-3026-SM-59HJC 325.2
GTEX-NPJ7-2726-SM-2I3FT 324.5
GTEX-WWYW-3126-SM-3NB39 320.8
GTEX-WVLH-3026-SM-3MJG9 318.2
GTEX-111FC-3126-SM-5GZZ2 307.1
GTEX-117XS-3026-SM-5N9CA 300.3
GTEX-QDT8-2926-SM-32PKC 300.0
GTEX-145MH-3026-SM-5Q5DZ 290.7
GTEX-RNOR-2326-SM-2TF4I 288.4
GTEX-1313W-3126-SM-5LZUI 286.6
GTEX-ZZPT-3026-SM-5GZXH 280.2
GTEX-T6MN-2626-SM-32PMQ 276.6
GTEX-13G51-3026-SM-5IJB8 275.2
GTEX-X4XX-3026-SM-3NMB2 269.3
GTEX-13VXU-2926-SM-5LU5C 267.1
GTEX-QVJO-1426-SM-2S1QY 261.8
GTEX-X585-3026-SM-46MWF 257.3
GTEX-NPJ8-1526-SM-2D7VU 241.8
GTEX-13NYS-3126-SM-5KLYV 236.5
GTEX-TSE9-3026-SM-3DB76 236.0
GTEX-N7MT-1126-SM-5SI7V 220.6
GTEX-11ZUS-2926-SM-5FQSL 219.0
GTEX-QMR6-1426-SM-32PLA 209.5
GTEX-ZAJG-3126-SM-5HL9J 198.5
GTEX-Z93S-2926-SM-57WB9 193.5
GTEX-T2IS-3026-SM-32QPM 163.0
GTEX-WL46-2926-SM-3LK82 153.4
GTEX-UTHO-3026-SM-3GAFB 115.4
GTEX-PVOW-2526-SM-2XCF7 107.5
GTEX-11OF3-2926-SM-5HL78 85.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 416.6
Samples: 108

Max RPKM: 1269.8
Min RPKM: 70.7
Std RPKM: 228.5
Median RPKM: 366.8
GTEX-12WSD-0011-R10b-SM-5GU79 1269.8
GTEX-13OVJ-0011-R10b-SM-5L3HT 1158.0
GTEX-1445S-0011-R10a-SM-5PNWB 1106.5
GTEX-131XW-0011-R10a-SM-5DUVA 1017.4
GTEX-ZV68-0011-R10a-SM-51MT7 979.0
GTEX-139TS-0011-R10a-SM-5K7TU 868.1
GTEX-13OW8-0011-R10a-SM-5L3H6 838.3
GTEX-11GSP-0011-R10a-SM-5NQ7J 761.4
GTEX-13OW7-0011-R10a-SM-5L3H3 694.7
GTEX-11WQC-0011-R10a-SM-57WCT 694.0
GTEX-13O3O-0011-R10a-SM-5LUA9 692.5
GTEX-13OW6-0011-R10a-SM-5L3HE 690.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 690.3
GTEX-13SLW-0011-R10a-SM-5S2UI 681.6
GTEX-145LU-0011-R10a-SM-5PNWJ 670.0
GTEX-13JVG-0011-R10b-SM-5KM2P 657.0
GTEX-147GR-0011-R10b-SM-5S2UM 612.6
GTEX-13JUV-0011-R10b-SM-5LZXR 605.6
GTEX-1477Z-0011-R10b-SM-5S2RF 600.0
GTEX-13FXS-0011-R10a-SM-5J2MA 580.0
GTEX-X261-0011-R10B-SM-4E3JT 578.8
GTEX-147F4-0011-R10b-SM-5S2WC 573.7
GTEX-11WQK-0011-R10a-SM-5BC6R 568.8
GTEX-13OVL-0011-R10a-SM-5L3GS 560.9
GTEX-11H98-0011-R10b-SM-5NQ98 557.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 552.9
GTEX-ZUA1-0011-R10a-SM-51MT6 546.8
GTEX-14753-0011-R10b-SM-5S2WE 542.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 541.6
GTEX-OXRO-0011-R10A-SM-2I5EH 509.5
GTEX-14BIL-0011-R10a-SM-5SI75 496.8
GTEX-13N2G-0011-R10a-SM-5MR34 479.1
GTEX-13FHO-0011-R10b-SM-5J2MM 476.1
GTEX-13NZA-0011-R10b-SM-5KM54 473.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 468.6
GTEX-13SLX-0011-R10a-SM-5P9HV 462.2
GTEX-12126-0011-R10b-SM-5BC6T 462.1
GTEX-RVPU-0011-R10A-SM-2XCAH 441.6
GTEX-TSE9-0011-R10A-SM-3DB7O 439.4
GTEX-NL4W-0011-R10A-SM-2I3DY 429.4
GTEX-12WSM-0011-R10a-SM-5DUWV 428.0
GTEX-13G51-0011-R10b-SM-5LZYF 427.0
GTEX-XLM4-0011-R10A-SM-4AT5P 424.5
GTEX-13NYS-0011-R10a-SM-5MR4S 418.4
GTEX-13N1W-0011-R10b-SM-5MR4H 406.2
GTEX-13NYB-0011-R10a-SM-5KM43 402.7
GTEX-12WSH-0011-R10a-SM-5LZUS 391.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 389.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 389.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 387.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 377.2
GTEX-12WSA-0011-R10b-SM-5P9ET 374.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 373.5
GTEX-13IVO-0011-R10a-SM-5LZY3 372.7
GTEX-X4EP-0011-R10B-SM-4QASJ 360.9
GTEX-ZVT3-0011-R10b-SM-57WB6 350.1
GTEX-ZXG5-0011-R10a-SM-57WDD 347.2
GTEX-145MG-0011-R10a-SM-5PNWG 342.2
GTEX-13QJC-0011-R10a-SM-5SI63 332.4
GTEX-13X6K-0011-R10a-SM-5P9JR 331.9
GTEX-13O3Q-0011-R10b-SM-5KM39 326.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 322.9
GTEX-YJ89-0011-R10a-SM-4SOK9 314.6
GTEX-13CZV-0011-R10b-SM-5LZYD 314.1
GTEX-12WSF-0011-R10a-SM-5LZVH 313.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 312.2
GTEX-T5JC-0011-R10A-SM-32PM2 304.5
GTEX-ZAB4-0011-R10a-SM-4SOKH 303.9
GTEX-13X6J-0011-R10b-SM-5PNWA 302.7
GTEX-14BIN-0011-R10a-SM-5S2UA 297.6
GTEX-ZF28-0011-R10a-SM-4WWEH 292.9
GTEX-P44H-0011-R10A-SM-2XCEK 291.5
GTEX-13QIC-0011-R10a-SM-5O9C7 276.5
GTEX-13S7M-0011-R10b-SM-5PNZB 274.5
GTEX-N7MT-0011-R10A-SM-2I3E1 271.6
GTEX-131YS-0011-R10b-SM-5EQ5N 265.6
GTEX-N7MS-0011-R10A-SM-2HMJK 265.0
GTEX-12WSC-0011-R10a-SM-5GU57 256.1
GTEX-S7SE-0011-R10A-SM-2XCDF 254.4
GTEX-XMD1-0011-R10A-SM-4AT4A 253.6
GTEX-OXRN-0011-R10A-SM-2I5GC 252.1
GTEX-YFC4-0011-R10a-SM-4SOK5 250.1
GTEX-Q2AG-0011-R10A-SM-2HMLA 250.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 249.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 246.4
GTEX-WZTO-0011-R10B-SM-4E3KB 238.1
GTEX-131XH-0011-R10a-SM-5EGLJ 233.3
GTEX-11ZUS-0011-R10b-SM-5BC79 232.0
GTEX-13FLW-0011-R10b-SM-5LZZF 231.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 231.0
GTEX-145LS-0011-R10a-SM-5PNUQ 227.5
GTEX-13X6I-0011-R10a-SM-5PNWI 227.4
GTEX-QMR6-0011-R10A-SM-32PKO 213.6
GTEX-12WSE-0011-R10b-SM-5P9JV 211.6
GTEX-QVUS-0011-R10A-SM-3GIK3 206.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 198.7
GTEX-WWYW-0011-R10A-SM-3NB35 198.4
GTEX-1313W-0011-R10b-SM-5DUXA 194.5
GTEX-T6MN-0011-R10A-SM-32QP7 189.7
GTEX-Z93S-0011-R10a-SM-4RGNM 187.5
GTEX-X4XX-0011-R10B-SM-46MWO 185.2
GTEX-WVLH-0011-R10A-SM-3MJFM 155.2
GTEX-145MH-0011-R10b-SM-5PNUK 150.6
GTEX-QDT8-0011-R10A-SM-32PKG 150.5
GTEX-NL3H-0011-R10A-SM-2I3E9 132.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 108.5
GTEX-X585-0011-R10A-SM-46MUY 95.2
GTEX-WL46-0011-R10A-SM-3MJFQ 70.7
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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