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Gene name

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External id

In atlas

Reliability

Reliability

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Validation

Method

Validation

Method

Validation

Method

Validation

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Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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MAP1LC3A
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TISSUE ATLAS PRIMARY DATA TESTIS

GENE/PROTEIN

Antibody validation


Dictionary

Testis

Tissue proteome

Testis

TESTIS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:37.7TPM
GTEx:32.1RPKM
FANTOM5:110.2Tags Per Million

TESTIS - Annotated protein expression

Annotated protein
expression

Cells in seminiferous ducts:Not detected
Leydig cells:Low
 

Antibody staining

Antibody HPA007649

 

Antibody HPA052474

 

Antibody HPA052484

 

Antibody CAB037174

 

Cells in seminiferous ducts

Not detected   Not detected   Not detected   Not detected  

Leydig cells

Medium   Not detected   Medium   Not detected  
       
       
       

TESTIS - HPA RNA-seq

Average TPM

37.7

overview Male, age 56
Sample 1
TPM: 40.0
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 2
TPM: 40.2
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25
overview Male, age 62
Sample 3
TPM: 57.6
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 34
Sample 4
TPM: 58.7
Cell types%
Cells in seminiferous ducts: 60
Other cell types: 40
overview Male, age 26
Sample 5
TPM: 49.1
Cell types%
Cells in seminiferous ducts: 55
Other cell types: 45
overview Male, age 50
Sample 6
TPM: 38.9
Cell types%
Cells in seminiferous ducts: 85
Other cell types: 15
overview Male, age 37
Sample 7
TPM: 39.2
Cell types%
Cells in seminiferous ducts: 35
Other cell types: 65
overview Male, age 51
Sample 8
TPM: 4.6
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 9
TPM: 24.6
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 26
Sample 10
TPM: 23.8
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25

TESTIS - GTEx RNA-seq

Average RPKM

32.1

GTEx sample id

RPKM

26.231.235.918.749.7051015202530354045505560
 
26.231.235.918.749.7051015202530354045505560

Testis

Testis
RPKM: 32.1
Samples: 172

Max RPKM: 62.2
Min RPKM: 18.7
Std RPKM: 7.4
Median RPKM: 31.2
GTEX-P4QR-0226-SM-3NMCH 62.2
GTEX-XPT6-1626-SM-4B655 54.7
GTEX-11EQ8-1426-SM-5EGJR 52.6
GTEX-ZTX8-1126-SM-51MRM 49.7
GTEX-QV31-1126-SM-4R1K4 48.7
GTEX-PW2O-1426-SM-48TCD 48.2
GTEX-1399Q-2826-SM-5IJEZ 47.9
GTEX-13O1R-0726-SM-5IJEI 47.6
GTEX-11O72-0726-SM-5P9GO 47.2
GTEX-QEG5-0126-SM-4R1JR 45.0
GTEX-S95S-1126-SM-4B64E 44.8
GTEX-ZT9X-1426-SM-5DUX1 44.8
GTEX-XQ3S-2726-SM-4BOP2 44.5
GTEX-Y5V6-1726-SM-4VDSZ 44.4
GTEX-SNMC-1026-SM-4DM7K 43.0
GTEX-12WSL-2326-SM-5DUXQ 42.4
GTEX-TKQ1-0926-SM-4DXU2 42.2
GTEX-OHPM-2126-SM-3LK75 41.7
GTEX-11GS4-2026-SM-5N9CP 41.5
GTEX-S4Q7-1226-SM-4AD5I 41.2
GTEX-U8T8-1126-SM-4DXUE 41.0
GTEX-13111-1526-SM-5EGJX 40.9
GTEX-144GN-1626-SM-5Q5BU 40.6
GTEX-N7MS-0126-SM-3TW8O 40.4
GTEX-13OVH-0726-SM-5N9BU 40.1
GTEX-XAJ8-1326-SM-47JYT 40.0
GTEX-R55D-0126-SM-48FEL 39.8
GTEX-X261-2326-SM-4PQYU 39.7
GTEX-PLZ5-1526-SM-3P5ZX 38.4
GTEX-13N2G-0126-SM-5N9DV 38.2
GTEX-T8EM-0126-SM-4DM5R 37.8
GTEX-13OW5-2526-SM-5L3I1 37.7
GTEX-XLM4-1526-SM-4AT6D 37.6
GTEX-XPVG-2226-SM-4B65U 37.4
GTEX-S3XE-1526-SM-4AD5A 37.2
GTEX-U3ZM-1626-SM-4DXSK 36.7
GTEX-11EI6-2226-SM-5EGJM 36.6
GTEX-WOFM-1126-SM-4OOSB 36.6
GTEX-13N1W-2626-SM-5IJEP 36.5
GTEX-11NUK-2626-SM-5A5MB 36.3
GTEX-11P82-1526-SM-5BC5M 36.3
GTEX-145MH-2326-SM-5O9AW 36.1
GTEX-14A6H-2326-SM-5Q5B5 36.0
GTEX-13FLW-2126-SM-5N9FD 35.9
GTEX-NFK9-0126-SM-3LK5H 35.9
GTEX-11NSD-1026-SM-5N9BE 35.8
GTEX-13NZA-2526-SM-5IJFX 35.7
GTEX-SUCS-1326-SM-4DM5T 35.6
GTEX-U8XE-0126-SM-4E3I3 35.6
GTEX-111YS-2026-SM-5EGGL 35.5
GTEX-O5YT-2126-SM-3MJGD 35.5
GTEX-QEG4-0126-SM-48TZE 35.5
GTEX-131XE-0426-SM-5IJF4 35.4
GTEX-13112-0226-SM-5P9IV 34.9
GTEX-X3Y1-2626-SM-4PQZI 34.8
GTEX-XBED-2026-SM-4AT5D 34.8
GTEX-145MO-0126-SM-5S2QU 34.7
GTEX-UPJH-0126-SM-4IHLL 34.6
GTEX-1339X-1926-SM-5PNVP 34.5
GTEX-T5JC-0726-SM-4DM55 34.5
GTEX-REY6-0126-SM-48FDT 34.3
GTEX-13VXU-0726-SM-5J2O7 33.9
GTEX-YJ89-0626-SM-4TT3Z 33.8
GTEX-11ZUS-2726-SM-5FQUA 33.7
GTEX-YF7O-2026-SM-4W1YE 33.7
GTEX-WH7G-1926-SM-4LVMM 33.3
GTEX-11WQK-2826-SM-5EQKH 33.0
GTEX-SNOS-1126-SM-4DM67 33.0
GTEX-ZQUD-2026-SM-51MSM 32.9
GTEX-U3ZH-1526-SM-4DXV1 32.8
GTEX-WVLH-2626-SM-4MVNV 32.6
GTEX-T6MN-2026-SM-4DM7L 32.5
GTEX-13NZB-2026-SM-5MR4M 32.4
GTEX-RWSA-2426-SM-47JXR 32.3
GTEX-Y8E4-2226-SM-5LU94 32.1
GTEX-11OF3-1826-SM-5987N 32.0
GTEX-QLQW-1026-SM-447A9 32.0
GTEX-RUSQ-2126-SM-47JXK 32.0
GTEX-13O21-1226-SM-5J2MK 31.9
GTEX-ZTSS-1526-SM-51MTC 31.9
GTEX-111CU-1726-SM-5EGHM 31.5
GTEX-OOBJ-2126-SM-3NB1N 31.5
GTEX-14753-0626-SM-5Q5CY 31.4
GTEX-YEC4-1526-SM-4W1YU 31.4
GTEX-ZA64-1626-SM-5CVME 31.4
GTEX-13FHP-2826-SM-5IJFW 31.3
GTEX-14ABY-0626-SM-5Q5C9 31.1
GTEX-WK11-0326-SM-4OOS6 31.1
GTEX-139TS-1726-SM-5IJG5 30.9
GTEX-11TT1-2226-SM-5GU6B 30.8
GTEX-XMK1-2026-SM-4B65K 30.7
GTEX-ZAB5-2426-SM-5CVMW 30.7
GTEX-OOBK-2126-SM-3LK5T 30.6
GTEX-117YW-1526-SM-5EGGP 30.4
GTEX-ZVTK-0126-SM-57WDG 30.4
GTEX-Q2AI-1226-SM-48U14 30.2
GTEX-12WSH-0326-SM-5GCNH 30.0
GTEX-ZVZP-2226-SM-57WBF 29.8
GTEX-117XS-2026-SM-5GID1 29.7
GTEX-RN64-2326-SM-48FDW 29.7
GTEX-TKQ2-1526-SM-4DXUN 29.7
GTEX-12WSI-2126-SM-5GCMV 29.6
GTEX-147JS-0126-SM-5S2TW 29.6
GTEX-ZAB4-0126-SM-5CVMG 29.6
GTEX-S33H-0126-SM-4AD62 29.1
GTEX-13OVL-0426-SM-5IFG6 28.9
GTEX-Z93S-1726-SM-5HL8G 28.9
GTEX-1399R-1626-SM-5P9GG 28.5
GTEX-YB5E-1926-SM-5IFIG 28.4
GTEX-ZYT6-2726-SM-5GICP 28.4
GTEX-11NV4-1726-SM-5N9FC 28.3
GTEX-P4QS-2126-SM-3NMCF 28.3
GTEX-11ONC-2226-SM-5HL6D 28.2
GTEX-V955-1926-SM-4KL1L 28.2
GTEX-XGQ4-2026-SM-4AT6G 28.2
GTEX-S7PM-0626-SM-4AD4Q 28.1
GTEX-Y111-2426-SM-4TT23 28.1
GTEX-132QS-1226-SM-5P9GD 28.0
GTEX-VJYA-1426-SM-4KL1Y 27.5
GTEX-Q2AH-1526-SM-48TZG 27.4
GTEX-111VG-1926-SM-5GIDO 27.1
GTEX-139T6-1226-SM-5IFFC 26.8
GTEX-11TUW-2226-SM-5EQL9 26.6
GTEX-13O61-2026-SM-5J2M6 26.6
GTEX-X5EB-2026-SM-4E3KA 26.6
GTEX-111FC-1926-SM-5GZYC 26.3
GTEX-ZUA1-2726-SM-59HLJ 26.3
GTEX-11P7K-1026-SM-5HL6Y 26.2
GTEX-144GM-0426-SM-5Q5C8 26.2
GTEX-QMRM-1526-SM-4R1K6 26.1
GTEX-S7SE-0326-SM-4AT5Q 26.0
GTEX-WFG8-1926-SM-4LVM1 25.9
GTEX-YFCO-1726-SM-4W21S 25.9
GTEX-OXRL-2126-SM-3NM98 25.8
GTEX-QV44-1726-SM-4R1KG 25.8
GTEX-V1D1-2126-SM-4JBH4 25.8
GTEX-OIZI-0126-SM-3NB13 25.7
GTEX-ZZ64-1126-SM-5GZXY 25.7
GTEX-11WQC-2326-SM-5EQKE 25.6
GTEX-12696-0226-SM-5EGL3 25.6
GTEX-YEC3-1726-SM-5IFIK 25.6
GTEX-144GL-0726-SM-5LU4P 25.3
GTEX-WFON-2026-SM-4LVMW 25.3
GTEX-XBEC-0126-SM-4GIDT 25.3
GTEX-RM2N-1326-SM-48FCW 24.7
GTEX-13NYB-2226-SM-5MR58 24.5
GTEX-13FTW-1326-SM-5LZZD 24.4
GTEX-12WSM-1326-SM-5GCP9 24.2
GTEX-11LCK-2326-SM-5HL53 24.1
GTEX-U4B1-1526-SM-4DXSL 24.1
GTEX-ZDTT-2026-SM-5K7TY 24.1
GTEX-OIZH-2126-SM-3NB1P 24.0
GTEX-ZV7C-2026-SM-5NQ8F 23.8
GTEX-R55E-0726-SM-48FCZ 23.7
GTEX-ZDYS-1326-SM-5IJFF 23.7
GTEX-11DXZ-2126-SM-59881 23.5
GTEX-R55C-1426-SM-48FED 23.2
GTEX-ZT9W-2226-SM-57WFU 23.0
GTEX-WHSB-2126-SM-4M1XF 22.7
GTEX-139TT-2226-SM-5LZWO 22.6
GTEX-13OW6-0126-SM-5IJGM 22.4
GTEX-ZPU1-2126-SM-57WED 22.3
GTEX-ZYFC-0126-SM-5GIEH 22.1
GTEX-12C56-1426-SM-5FQSW 22.0
GTEX-147F4-0626-SM-5LUAK 21.9
GTEX-12ZZY-0126-SM-5LZV2 21.7
GTEX-11EQ9-1926-SM-5PNVV 21.6
GTEX-1212Z-0326-SM-5FQSJ 21.6
GTEX-QLQ7-1426-SM-4R1JX 21.6
GTEX-Y9LG-1726-SM-4VBQE 21.0
GTEX-WZTO-0326-SM-4PQYZ 19.6
GTEX-145LT-0426-SM-5LUAP 18.7
Show all

TESTIS - FANTOM5 CAGE

Average Tags Per Million

110.2

FANTOM5 sample id

Sample description

Tags Per Million

Testis
Tags Per Million: 110.2
FF:10096-102C6 14-64 years, male 119.9
FF:10026-101D8 34,53,86 years, male 100.5

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