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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

RNA expression

HPA:82.5TPM
GTEx:22.2RPKM

CEREBRAL CORTEX - Annotated protein expression

 

Antibody staining

Antibody HPA000325

 

Antibody HPA000967

 

Endothelial cells

Not detected   Low  

Glial cells

Not detected   Medium  

Neuronal cells

High   Medium  

Neuropil

Not detected   Medium  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

82.5

N/A Male, age 5
Sample 1
TPM: 68.7
overview Female, age 40
Sample 2
TPM: 87.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 91.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

22.2

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 20.1
Samples: 114

Max RPKM: 36.7
Min RPKM: 12.6
Std RPKM: 4.1
Median RPKM: 20.1
GTEX-PVOW-2526-SM-2XCF7 36.7
GTEX-X585-3026-SM-46MWF 29.9
GTEX-WHSE-3026-SM-3P5ZH 29.7
GTEX-T2IS-3026-SM-32QPM 28.4
GTEX-UTHO-3026-SM-3GAFB 28.4
GTEX-11DXY-3226-SM-5GIDE 26.3
GTEX-145MH-3026-SM-5Q5DZ 25.4
GTEX-QMR6-1426-SM-32PLA 25.4
GTEX-WVLH-3026-SM-3MJG9 25.1
GTEX-WWYW-3126-SM-3NB39 25.1
GTEX-T5JC-2426-SM-3NMDB 25.0
GTEX-WL46-2926-SM-3LK82 24.9
GTEX-WZTO-2926-SM-3NM9I 24.9
GTEX-12ZZX-2926-SM-5GCOQ 24.7
GTEX-ZAK1-3026-SM-5S2MJ 24.7
GTEX-TSE9-3026-SM-3DB76 24.4
GTEX-YFC4-3126-SM-5PNV6 24.4
GTEX-ZUA1-3026-SM-59HJC 24.4
GTEX-11PRG-2926-SM-5987A 24.3
GTEX-X4XX-3026-SM-3NMB2 24.2
GTEX-Y8DK-0826-SM-4TT3T 24.2
GTEX-111FC-3126-SM-5GZZ2 24.1
GTEX-QVJO-1426-SM-2S1QY 24.1
GTEX-13NYC-2826-SM-5K7WR 23.9
GTEX-11NUK-2926-SM-5A5MD 23.8
GTEX-RNOR-2326-SM-2TF4I 23.8
GTEX-11ZUS-2926-SM-5FQSL 23.7
GTEX-13OW6-3026-SM-5J2MI 23.3
GTEX-14ASI-3026-SM-5S2PN 23.2
GTEX-14BMV-3026-SM-5S2PQ 23.0
GTEX-12ZZZ-3026-SM-5BC67 22.9
GTEX-13FHO-3026-SM-5J1O9 22.9
GTEX-Z93S-2926-SM-57WB9 22.8
GTEX-13FLW-1426-SM-5K7YE 22.7
GTEX-T6MN-2626-SM-32PMQ 22.4
GTEX-11OC5-0726-SM-5P9JK 22.2
GTEX-131YS-3126-SM-5KLYT 21.9
GTEX-1313W-3126-SM-5LZUI 21.8
GTEX-13VXU-2926-SM-5LU5C 21.8
GTEX-13OVH-3026-SM-5MR4N 21.5
GTEX-13FHP-3026-SM-5IJBS 21.4
GTEX-145LS-3126-SM-5Q5BY 21.4
GTEX-13JVG-3126-SM-5L3FH 21.3
GTEX-12WSC-3026-SM-5GCNF 21.1
GTEX-144GL-3026-SM-5Q5CW 21.1
GTEX-XLM4-3026-SM-4AT6L 21.1
GTEX-1399T-3026-SM-5KLZC 20.9
GTEX-13FXS-3126-SM-5J2NN 20.8
GTEX-13O3Q-2926-SM-5KM45 20.8
GTEX-12ZZY-3026-SM-5GCOU 20.7
GTEX-13NYB-3026-SM-5IJD7 20.7
GTEX-13X6J-3026-SM-5Q5CU 20.7
GTEX-145MF-2726-SM-5O995 20.6
GTEX-QVUS-2826-SM-3GADB 20.6
GTEX-117XS-3026-SM-5N9CA 20.4
GTEX-12126-1026-SM-5P9JJ 20.3
GTEX-QDT8-2926-SM-32PKC 20.1
GTEX-11GSO-2926-SM-5HL73 20.0
GTEX-132Q8-3026-SM-5PNVG 19.8
GTEX-XOTO-3026-SM-4B65M 19.5
GTEX-13NYS-3126-SM-5KLYV 19.4
GTEX-ZYFD-3026-SM-5E44C 19.4
GTEX-13O3O-3126-SM-5KM3H 19.3
GTEX-13JUV-2926-SM-5LZX7 19.2
GTEX-1192X-3126-SM-5N9BY 19.0
GTEX-13PVQ-3026-SM-5SI93 19.0
GTEX-13OVJ-2826-SM-5L3GW 18.9
GTEX-NPJ8-1526-SM-2D7VU 18.8
GTEX-11DXW-1126-SM-5H12Q 18.7
GTEX-145MG-3026-SM-5RQJA 18.7
GTEX-11WQK-3026-SM-5EQL6 18.6
GTEX-13G51-3026-SM-5IJB8 18.6
GTEX-13SLX-3126-SM-5S2Q5 18.3
GTEX-144FL-3026-SM-5O99C 18.3
GTEX-1128S-2726-SM-5H12C 18.0
GTEX-Q2AG-2926-SM-2HMJ3 18.0
GTEX-R55F-1326-SM-5S2V4 17.9
GTEX-Y111-2726-SM-4TT3N 17.9
GTEX-ZZPT-3026-SM-5GZXH 17.8
GTEX-13X6K-2926-SM-5Q5D5 17.7
GTEX-14A5I-2926-SM-5Q5CQ 17.5
GTEX-RU72-3026-SM-5SI7Y 17.5
GTEX-YJ89-3026-SM-5IFJI 17.4
GTEX-13PL6-3126-SM-5LUAR 17.3
GTEX-N7MT-1126-SM-5SI7V 17.0
GTEX-11ONC-2926-SM-5P9JM 16.9
GTEX-13QIC-2926-SM-5J2NF 16.9
GTEX-147GR-3026-SM-5S2ML 16.9
GTEX-ZVT3-3026-SM-5E43N 16.7
GTEX-11O72-2926-SM-5BC4V 16.4
GTEX-12WSH-3026-SM-5CVNI 16.3
GTEX-139T8-1026-SM-5J2MC 16.3
GTEX-NPJ7-2726-SM-2I3FT 16.2
GTEX-11GSP-3226-SM-5986O 16.0
GTEX-OXRN-2426-SM-2I5EQ 15.9
GTEX-13OW8-2826-SM-5L3GC 15.8
GTEX-12WSA-2926-SM-5EQ4D 15.7
GTEX-11EI6-3026-SM-5GZZO 15.6
GTEX-PWO3-0926-SM-2I5EY 15.5
GTEX-12WSD-3126-SM-5HL7P 15.3
GTEX-11GS4-3126-SM-5A5LH 15.2
GTEX-ZE7O-3126-SM-5HL5X 15.2
GTEX-ZAJG-3126-SM-5HL9J 14.8
GTEX-13S7M-3126-SM-5RQJQ 14.4
GTEX-11OF3-2926-SM-5HL78 14.3
GTEX-13IVO-2926-SM-5L3CZ 14.3
GTEX-11NV4-2126-SM-5N9DS 14.2
GTEX-12ZZW-2926-SM-5LZUP 14.2
GTEX-11TTK-2926-SM-5PNYP 13.9
GTEX-13OW7-3026-SM-5L3GY 13.9
GTEX-11EMC-3226-SM-5EGKW 13.7
GTEX-131XW-3126-SM-5LZUC 13.4
GTEX-1445S-3026-SM-5O9BR 12.7
GTEX-1117F-3226-SM-5N9CT 12.6
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 24.3
Samples: 108

Max RPKM: 39.1
Min RPKM: 8
Std RPKM: 6.8
Median RPKM: 24.5
GTEX-WL46-0011-R10A-SM-3MJFQ 39.1
GTEX-S7SE-0011-R10A-SM-2XCDF 38.8
GTEX-T6MN-0011-R10A-SM-32QP7 38.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 38.5
GTEX-X585-0011-R10A-SM-46MUY 37.8
GTEX-WVLH-0011-R10A-SM-3MJFM 37.7
GTEX-145MH-0011-R10b-SM-5PNUK 35.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 34.1
GTEX-Q2AG-0011-R10A-SM-2HMLA 34.0
GTEX-QDT8-0011-R10A-SM-32PKG 33.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 31.9
GTEX-13X6J-0011-R10b-SM-5PNWA 31.9
GTEX-T5JC-0011-R10A-SM-32PM2 31.8
GTEX-WWYW-0011-R10A-SM-3NB35 31.6
GTEX-131YS-0011-R10b-SM-5EQ5N 31.2
GTEX-QVUS-0011-R10A-SM-3GIK3 30.9
GTEX-WZTO-0011-R10B-SM-4E3KB 30.9
GTEX-YFC4-0011-R10a-SM-4SOK5 30.9
GTEX-13O3Q-0011-R10b-SM-5KM39 30.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 30.5
GTEX-1313W-0011-R10b-SM-5DUXA 30.4
GTEX-145MG-0011-R10a-SM-5PNWG 30.1
GTEX-N7MS-0011-R10A-SM-2HMJK 30.1
GTEX-11ZUS-0011-R10b-SM-5BC79 29.6
GTEX-12WSE-0011-R10b-SM-5P9JV 29.5
GTEX-13FLW-0011-R10b-SM-5LZZF 29.5
GTEX-QMR6-0011-R10A-SM-32PKO 29.5
GTEX-12WSC-0011-R10a-SM-5GU57 28.8
GTEX-131XH-0011-R10a-SM-5EGLJ 28.6
GTEX-NL3H-0011-R10A-SM-2I3E9 28.4
GTEX-X4EP-0011-R10B-SM-4QASJ 28.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 28.3
GTEX-YJ89-0011-R10a-SM-4SOK9 28.0
GTEX-ZUA1-0011-R10a-SM-51MT6 27.5
GTEX-12WSM-0011-R10a-SM-5DUWV 27.4
GTEX-X4XX-0011-R10B-SM-46MWO 27.4
GTEX-13NYB-0011-R10a-SM-5KM43 26.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 26.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 26.7
GTEX-13X6I-0011-R10a-SM-5PNWI 26.6
GTEX-Z93S-0011-R10a-SM-4RGNM 26.3
GTEX-XLM4-0011-R10A-SM-4AT5P 26.2
GTEX-ZE7O-0011-R10a-SM-57WAZ 26.0
GTEX-13SLX-0011-R10a-SM-5P9HV 25.9
GTEX-13X6K-0011-R10a-SM-5P9JR 25.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 25.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 25.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 25.7
GTEX-145LS-0011-R10a-SM-5PNUQ 25.5
GTEX-13G51-0011-R10b-SM-5LZYF 25.4
GTEX-12WSF-0011-R10a-SM-5LZVH 25.3
GTEX-13FXS-0011-R10a-SM-5J2MA 25.3
GTEX-12126-0011-R10b-SM-5BC6T 24.6
GTEX-ZAB4-0011-R10a-SM-4SOKH 24.5
GTEX-13FHO-0011-R10b-SM-5J2MM 24.4
GTEX-13JUV-0011-R10b-SM-5LZXR 24.3
GTEX-14BIN-0011-R10a-SM-5S2UA 24.3
GTEX-11H98-0011-R10b-SM-5NQ98 24.0
GTEX-13OVL-0011-R10a-SM-5L3GS 24.0
GTEX-P44H-0011-R10A-SM-2XCEK 23.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 23.7
GTEX-13QIC-0011-R10a-SM-5O9C7 23.6
GTEX-13JVG-0011-R10b-SM-5KM2P 23.5
GTEX-TSE9-0011-R10A-SM-3DB7O 23.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 23.4
GTEX-147GR-0011-R10b-SM-5S2UM 23.3
GTEX-13CZV-0011-R10b-SM-5LZYD 23.2
GTEX-13N2G-0011-R10a-SM-5MR34 22.9
GTEX-13S7M-0011-R10b-SM-5PNZB 22.0
GTEX-XMD1-0011-R10A-SM-4AT4A 21.6
GTEX-N7MT-0011-R10A-SM-2I3E1 21.5
GTEX-ZF28-0011-R10a-SM-4WWEH 21.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 21.4
GTEX-13OW7-0011-R10a-SM-5L3H3 20.9
GTEX-13N1W-0011-R10b-SM-5MR4H 20.8
GTEX-13OW8-0011-R10a-SM-5L3H6 20.8
GTEX-13OW6-0011-R10a-SM-5L3HE 20.4
GTEX-13QJC-0011-R10a-SM-5SI63 19.9
GTEX-13O3O-0011-R10a-SM-5LUA9 19.7
GTEX-OXRN-0011-R10A-SM-2I5GC 19.5
GTEX-12WSH-0011-R10a-SM-5LZUS 19.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 18.8
GTEX-14BIL-0011-R10a-SM-5SI75 18.7
GTEX-NL4W-0011-R10A-SM-2I3DY 18.6
GTEX-12WSA-0011-R10b-SM-5P9ET 18.1
GTEX-13NYS-0011-R10a-SM-5MR4S 18.1
GTEX-11WQK-0011-R10a-SM-5BC6R 18.0
GTEX-139TS-0011-R10a-SM-5K7TU 17.5
GTEX-12WSD-0011-R10b-SM-5GU79 17.4
GTEX-ZVT3-0011-R10b-SM-57WB6 17.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 17.0
GTEX-145LU-0011-R10a-SM-5PNWJ 16.9
GTEX-147F4-0011-R10b-SM-5S2WC 16.6
GTEX-ZXG5-0011-R10a-SM-57WDD 16.6
GTEX-11WQC-0011-R10a-SM-57WCT 16.0
GTEX-RVPU-0011-R10A-SM-2XCAH 15.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 15.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 15.4
GTEX-13SLW-0011-R10a-SM-5S2UI 15.3
GTEX-1445S-0011-R10a-SM-5PNWB 15.3
GTEX-X261-0011-R10B-SM-4E3JT 14.8
GTEX-OXRO-0011-R10A-SM-2I5EH 12.4
GTEX-13NZA-0011-R10b-SM-5KM54 12.2
GTEX-1477Z-0011-R10b-SM-5S2RF 11.7
GTEX-14753-0011-R10b-SM-5S2WE 11.3
GTEX-ZV68-0011-R10a-SM-51MT7 11.3
GTEX-13IVO-0011-R10a-SM-5LZY3 10.6
GTEX-131XW-0011-R10a-SM-5DUVA 8.0
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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