We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
DNAJA3
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:11.4RPKM
FANTOM5:75.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA040875

 

Antibody HPA044229

 

Antibody CAB016095

 

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Medium   Medium   Low  
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

11.4

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 11.4
Samples: 117

Max RPKM: 18.3
Min RPKM: 3.7
Std RPKM: 3
Median RPKM: 11.6
GTEX-13G51-0011-R5a-SM-5L3EB 18.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 17.7
GTEX-T6MN-0011-R5A-SM-32QPD 17.0
GTEX-131YS-0011-R5b-SM-5K7YB 16.7
GTEX-WWYW-0011-R5A-SM-3NB3E 16.2
GTEX-WHSE-0011-R5A-SM-3P5ZO 15.9
GTEX-X585-0011-R5A-SM-46MVI 15.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 15.7
GTEX-13NYS-0011-R5a-SM-5MR4D 15.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 15.6
GTEX-1313W-0011-R5b-SM-5L3EP 15.1
GTEX-11GSP-0011-R5a-SM-57WBE 14.9
GTEX-132Q8-0011-R5a-SM-5IJDM 14.9
GTEX-13X6K-0011-R5b-SM-5PNUE 14.9
GTEX-T5JC-0011-R5A-SM-32PLK 14.8
GTEX-ZUA1-0011-R5b-SM-51MTG 14.8
GTEX-14BIM-0011-R5b-SM-5S2RM 14.7
GTEX-QVJO-0011-R5A-SM-2S1QM 14.5
GTEX-N7MT-0011-R5a-SM-2I3G6 14.1
GTEX-11H98-0011-R5b-SM-57WCF 14.0
GTEX-1399T-0011-R5b-SM-5IJDK 14.0
GTEX-S7SE-0011-R5A-SM-2XCDA 14.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 13.9
GTEX-145LS-0011-R5a-SM-5SI65 13.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 13.8
GTEX-12WSC-0011-R5b-SM-5CVNS 13.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 13.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 13.7
GTEX-12WSF-0011-R5a-SM-5HL8K 13.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 13.4
GTEX-WVLH-0011-R5A-SM-3MJFW 13.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 13.3
GTEX-WL46-0011-R5A-SM-3LK6V 13.3
GTEX-13VXU-0011-R5a-SM-5O9D7 13.2
GTEX-13X6I-0011-R5a-SM-5PNWW 13.2
GTEX-12WSB-0011-R5b-SM-5GU67 13.1
GTEX-X4XX-0011-R5A-SM-46MWN 13.1
GTEX-139TT-0011-R5b-SM-5K7W8 13.0
GTEX-13OVL-0011-R5b-SM-5L3FU 13.0
GTEX-X261-0011-R5A-SM-3NMB4 13.0
GTEX-WZTO-0011-R5B-SM-3NMC5 12.9
GTEX-13OW6-0011-R5a-SM-5O9BK 12.8
GTEX-13JVG-0011-R5a-SM-5MR4O 12.7
GTEX-145MH-0011-R5a-SM-5P9JT 12.7
GTEX-N7MS-0011-R5a-SM-2HMK8 12.7
GTEX-UTHO-0011-R5A-SM-3GIJD 12.7
GTEX-RU72-0011-R5A-SM-2TF6U 12.6
GTEX-13JUV-0011-R5a-SM-5LZY5 12.3
GTEX-11OF3-0011-R5a-SM-57WB4 12.2
GTEX-R55E-0011-R5A-SM-2TC5N 12.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 12.1
GTEX-13NYB-0011-R5a-SM-5MR45 12.1
GTEX-13OW5-0011-R5b-SM-5L3FR 12.0
GTEX-13S7M-0011-R5b-SM-5P9HS 12.0
GTEX-13SLX-0011-R5a-SM-5O9BV 11.9
GTEX-13X6J-0011-R5b-SM-5PNWT 11.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 11.9
GTEX-13FXS-0011-R5b-SM-5LZYE 11.8
GTEX-12WSA-0011-R5b-SM-5GU5I 11.6
GTEX-14ABY-0011-R5b-SM-5SI7B 11.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 11.5
GTEX-P44H-0011-R5A-SM-2XCEX 11.5
GTEX-XMD1-0011-R5A-SM-4AT47 11.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 11.4
GTEX-13FLW-0011-R5a-SM-5LZX6 11.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 11.3
GTEX-T2IS-0011-R5A-SM-32QP4 11.3
GTEX-13FLV-0011-R5a-SM-5LZWT 11.2
GTEX-RVPV-0011-R5A-SM-2TF69 11.2
GTEX-PVOW-0011-R5A-SM-32PL7 11.1
GTEX-NL4W-0011-R5a-SM-2I3GD 10.9
GTEX-13OVH-0011-R5b-SM-5KM4L 10.7
GTEX-Z93S-0011-R5b-SM-4RGNI 10.6
GTEX-13CZV-0011-R5a-SM-5K7XA 10.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 10.4
GTEX-11NV4-0011-R5a-SM-5NQ88 10.3
GTEX-13O3O-0011-R5b-SM-5KM44 10.3
GTEX-12ZZX-0011-R5a-SM-5HL89 10.2
GTEX-13OW7-0011-R5b-SM-5O9DM 10.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 10.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 9.8
GTEX-ZE7O-0011-R5a-SM-57WBO 9.8
GTEX-13CIG-0011-R5b-SM-5L3F2 9.7
GTEX-144GO-0011-R5a-SM-5PNUR 9.6
GTEX-TSE9-0011-R5A-SM-3DB7J 9.6
GTEX-12WSD-0011-R5b-SM-5CVNG 9.5
GTEX-1445S-0011-R5a-SM-5PNUS 9.4
GTEX-XOTO-0011-R5A-SM-4B657 9.4
GTEX-NL3H-0011-R5a-SM-2I3GB 9.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 9.2
GTEX-YFC4-0011-R5a-SM-4RGLR 9.1
GTEX-ZXG5-0011-R5b-SM-57WBN 9.0
GTEX-139TS-0011-R5b-SM-5J2MZ 8.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 8.9
GTEX-14BIN-0011-R5b-SM-5SI78 8.8
GTEX-OHPN-0011-R5A-SM-2I5FF 8.6
GTEX-QMR6-0011-R5A-SM-32PKT 8.5
GTEX-ZV68-0011-R5a-SM-4YCDW 8.4
GTEX-ZVT3-0011-R5a-SM-51MSI 8.3
GTEX-NPJ7-0011-R5a-SM-33HBK 8.0
GTEX-139T8-0011-R5b-SM-5J1MO 7.9
GTEX-RVPU-0011-R5A-SM-2XCAD 7.8
GTEX-13112-0011-R5b-SM-5DUV8 7.4
GTEX-144GL-0011-R5b-SM-5PNUJ 7.3
GTEX-11WQC-0011-R5a-SM-5BC74 7.1
GTEX-OXRN-0011-R5A-SM-2I5EF 7.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 6.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 6.7
GTEX-12WSH-0011-R5b-SM-5P9F3 6.5
GTEX-11UD1-0011-R5b-SM-5P9FP 6.2
GTEX-13FHP-0011-R5b-SM-5LZY2 6.1
GTEX-YJ89-0011-R5a-SM-4V6GM 5.9
GTEX-13CF2-0011-R5a-SM-5LZWS 5.5
GTEX-S7PM-0011-R5A-SM-3NM8G 5.4
GTEX-1477Z-0011-R5b-SM-5PNUO 5.2
GTEX-145MG-0011-R5b-SM-5S2VU 4.2
GTEX-13NZA-0011-R5b-SM-5KM4K 3.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

75.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 75.9
FF:10379-105H1 89 years, female 95.5
FF:10164-103B2 76 years, female 56.3

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.