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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:14.2TPM
GTEx:14.8RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Low
Neuronal cells:Medium
Neuropil:Not detected
 

Antibody staining

Antibody HPA040875

 

Antibody HPA044229

 

Antibody CAB016095

 

Endothelial cells

Not detected   Not detected   Not detected  

Glial cells

Low   Not detected   Not detected  

Neuronal cells

Medium   High   Medium  

Neuropil

Medium   Not detected   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

14.2

N/A Male, age 5
Sample 1
TPM: 14.7
overview Female, age 40
Sample 2
TPM: 13.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 14.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

14.8

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 14.9
Samples: 114

Max RPKM: 21.2
Min RPKM: 7.1
Std RPKM: 2.8
Median RPKM: 14.8
GTEX-X585-3026-SM-46MWF 21.2
GTEX-WWYW-3126-SM-3NB39 20.9
GTEX-13NYC-2826-SM-5K7WR 19.9
GTEX-13NYS-3126-SM-5KLYV 19.9
GTEX-T5JC-2426-SM-3NMDB 19.5
GTEX-WVLH-3026-SM-3MJG9 19.2
GTEX-14BMV-3026-SM-5S2PQ 19.0
GTEX-13FXS-3126-SM-5J2NN 18.6
GTEX-WZTO-2926-SM-3NM9I 18.6
GTEX-X4XX-3026-SM-3NMB2 18.5
GTEX-12ZZX-2926-SM-5GCOQ 18.4
GTEX-13FHO-3026-SM-5J1O9 18.3
GTEX-1313W-3126-SM-5LZUI 18.1
GTEX-T6MN-2626-SM-32PMQ 18.1
GTEX-WL46-2926-SM-3LK82 18.0
GTEX-1192X-3126-SM-5N9BY 17.9
GTEX-12ZZY-3026-SM-5GCOU 17.9
GTEX-XLM4-3026-SM-4AT6L 17.9
GTEX-YFC4-3126-SM-5PNV6 17.9
GTEX-11DXY-3226-SM-5GIDE 17.7
GTEX-14ASI-3026-SM-5S2PN 17.7
GTEX-T2IS-3026-SM-32QPM 17.7
GTEX-11GSO-2926-SM-5HL73 17.5
GTEX-RNOR-2326-SM-2TF4I 17.3
GTEX-117XS-3026-SM-5N9CA 17.2
GTEX-NPJ8-1526-SM-2D7VU 17.2
GTEX-R55F-1326-SM-5S2V4 17.2
GTEX-11OF3-2926-SM-5HL78 17.0
GTEX-QVJO-1426-SM-2S1QY 17.0
GTEX-13OW8-2826-SM-5L3GC 16.9
GTEX-145LS-3126-SM-5Q5BY 16.9
GTEX-13OW6-3026-SM-5J2MI 16.8
GTEX-13VXU-2926-SM-5LU5C 16.8
GTEX-ZAK1-3026-SM-5S2MJ 16.8
GTEX-132Q8-3026-SM-5PNVG 16.7
GTEX-ZYFD-3026-SM-5E44C 16.7
GTEX-ZUA1-3026-SM-59HJC 16.5
GTEX-WHSE-3026-SM-3P5ZH 16.4
GTEX-111FC-3126-SM-5GZZ2 16.3
GTEX-13SLX-3126-SM-5S2Q5 16.2
GTEX-13FLW-1426-SM-5K7YE 16.1
GTEX-11DXW-1126-SM-5H12Q 15.9
GTEX-11OC5-0726-SM-5P9JK 15.9
GTEX-131YS-3126-SM-5KLYT 15.9
GTEX-13OVH-3026-SM-5MR4N 15.8
GTEX-12WSC-3026-SM-5GCNF 15.7
GTEX-13NYB-3026-SM-5IJD7 15.7
GTEX-145MH-3026-SM-5Q5DZ 15.7
GTEX-13O3Q-2926-SM-5KM45 15.5
GTEX-1128S-2726-SM-5H12C 15.1
GTEX-144GL-3026-SM-5Q5CW 15.1
GTEX-QMR6-1426-SM-32PLA 15.1
GTEX-YJ89-3026-SM-5IFJI 15.1
GTEX-Z93S-2926-SM-57WB9 14.9
GTEX-11NUK-2926-SM-5A5MD 14.8
GTEX-11ZUS-2926-SM-5FQSL 14.8
GTEX-12126-1026-SM-5P9JJ 14.8
GTEX-144FL-3026-SM-5O99C 14.8
GTEX-PVOW-2526-SM-2XCF7 14.8
GTEX-Y111-2726-SM-4TT3N 14.8
GTEX-11ONC-2926-SM-5P9JM 14.7
GTEX-UTHO-3026-SM-3GAFB 14.7
GTEX-ZVT3-3026-SM-5E43N 14.7
GTEX-11PRG-2926-SM-5987A 14.6
GTEX-12ZZZ-3026-SM-5BC67 14.6
GTEX-145MF-2726-SM-5O995 14.6
GTEX-145MG-3026-SM-5RQJA 14.6
GTEX-13FHP-3026-SM-5IJBS 14.4
GTEX-TSE9-3026-SM-3DB76 14.4
GTEX-RU72-3026-SM-5SI7Y 14.3
GTEX-Y8DK-0826-SM-4TT3T 14.3
GTEX-11GS4-3126-SM-5A5LH 14.2
GTEX-XOTO-3026-SM-4B65M 14.2
GTEX-ZZPT-3026-SM-5GZXH 14.2
GTEX-QVUS-2826-SM-3GADB 14.1
GTEX-13O3O-3126-SM-5KM3H 14.0
GTEX-Q2AG-2926-SM-2HMJ3 14.0
GTEX-1399T-3026-SM-5KLZC 13.9
GTEX-13OVJ-2826-SM-5L3GW 13.7
GTEX-QDT8-2926-SM-32PKC 13.5
GTEX-13G51-3026-SM-5IJB8 13.4
GTEX-14A5I-2926-SM-5Q5CQ 13.4
GTEX-OXRN-2426-SM-2I5EQ 13.4
GTEX-ZAJG-3126-SM-5HL9J 13.4
GTEX-12WSH-3026-SM-5CVNI 13.3
GTEX-13QIC-2926-SM-5J2NF 13.3
GTEX-11WQK-3026-SM-5EQL6 13.2
GTEX-1117F-3226-SM-5N9CT 12.9
GTEX-11O72-2926-SM-5BC4V 12.9
GTEX-13PL6-3126-SM-5LUAR 12.8
GTEX-12ZZW-2926-SM-5LZUP 12.3
GTEX-11EI6-3026-SM-5GZZO 12.1
GTEX-13OW7-3026-SM-5L3GY 12.1
GTEX-13S7M-3126-SM-5RQJQ 12.1
GTEX-139T8-1026-SM-5J2MC 12.0
GTEX-13X6J-3026-SM-5Q5CU 12.0
GTEX-NPJ7-2726-SM-2I3FT 12.0
GTEX-11EMC-3226-SM-5EGKW 11.9
GTEX-13JVG-3126-SM-5L3FH 11.5
GTEX-13IVO-2926-SM-5L3CZ 11.4
GTEX-N7MT-1126-SM-5SI7V 11.3
GTEX-11TTK-2926-SM-5PNYP 11.2
GTEX-13X6K-2926-SM-5Q5D5 11.2
GTEX-12WSD-3126-SM-5HL7P 11.0
GTEX-131XW-3126-SM-5LZUC 10.8
GTEX-1445S-3026-SM-5O9BR 10.6
GTEX-13JUV-2926-SM-5LZX7 10.5
GTEX-ZE7O-3126-SM-5HL5X 10.4
GTEX-11GSP-3226-SM-5986O 9.5
GTEX-147GR-3026-SM-5S2ML 9.5
GTEX-13PVQ-3026-SM-5SI93 9.2
GTEX-PWO3-0926-SM-2I5EY 9.1
GTEX-12WSA-2926-SM-5EQ4D 8.1
GTEX-11NV4-2126-SM-5N9DS 7.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 14.6
Samples: 108

Max RPKM: 23.3
Min RPKM: 6.5
Std RPKM: 3.8
Median RPKM: 14.7
GTEX-X585-0011-R10A-SM-46MUY 23.3
GTEX-X4EP-0011-R10B-SM-4QASJ 23.0
GTEX-13NYS-0011-R10a-SM-5MR4S 21.3
GTEX-13N2G-0011-R10a-SM-5MR34 20.5
GTEX-12WSF-0011-R10a-SM-5LZVH 20.0
GTEX-132Q8-0011-R10b-SM-5DUWZ 19.7
GTEX-1313W-0011-R10b-SM-5DUXA 19.4
GTEX-13FHO-0011-R10b-SM-5J2MM 19.4
GTEX-13X6K-0011-R10a-SM-5P9JR 19.4
GTEX-T5JC-0011-R10A-SM-32PM2 19.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 19.3
GTEX-WWYW-0011-R10A-SM-3NB35 19.2
GTEX-X4XX-0011-R10B-SM-46MWO 19.2
GTEX-YFC4-0011-R10a-SM-4SOK5 19.2
GTEX-12ZZY-0011-R10b-SM-5HL7W 18.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 18.6
GTEX-NL3H-0011-R10A-SM-2I3E9 18.6
GTEX-131XH-0011-R10a-SM-5EGLJ 18.3
GTEX-145MG-0011-R10a-SM-5PNWG 18.3
GTEX-WVLH-0011-R10A-SM-3MJFM 18.3
GTEX-XLM4-0011-R10A-SM-4AT5P 18.2
GTEX-12WSE-0011-R10b-SM-5P9JV 18.1
GTEX-ZF28-0011-R10a-SM-4WWEH 18.1
GTEX-131YS-0011-R10b-SM-5EQ5N 18.0
GTEX-13O3Q-0011-R10b-SM-5KM39 18.0
GTEX-13S7M-0011-R10b-SM-5PNZB 18.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 18.0
GTEX-12WSC-0011-R10a-SM-5GU57 17.8
GTEX-T6MN-0011-R10A-SM-32QP7 17.8
GTEX-WZTO-0011-R10B-SM-4E3KB 17.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 17.7
GTEX-13RTJ-0011-R10b-SM-5O9CW 17.5
GTEX-14BIL-0011-R10a-SM-5SI75 17.5
GTEX-145MH-0011-R10b-SM-5PNUK 17.4
GTEX-13CZV-0011-R10b-SM-5LZYD 17.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 17.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 17.1
GTEX-S7SE-0011-R10A-SM-2XCDF 17.1
GTEX-12WSM-0011-R10a-SM-5DUWV 17.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 16.5
GTEX-13OVL-0011-R10a-SM-5L3GS 16.2
GTEX-WL46-0011-R10A-SM-3MJFQ 16.2
GTEX-11H98-0011-R10b-SM-5NQ98 16.0
GTEX-13X6J-0011-R10b-SM-5PNWA 15.8
GTEX-YJ89-0011-R10a-SM-4SOK9 15.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 15.7
GTEX-14BIN-0011-R10a-SM-5S2UA 15.6
GTEX-12WSH-0011-R10a-SM-5LZUS 15.5
GTEX-145LS-0011-R10a-SM-5PNUQ 15.3
GTEX-13FLW-0011-R10b-SM-5LZZF 15.0
GTEX-13QIC-0011-R10a-SM-5O9C7 15.0
GTEX-147GR-0011-R10b-SM-5S2UM 14.8
GTEX-QVUS-0011-R10A-SM-3GIK3 14.8
GTEX-13OW7-0011-R10a-SM-5L3H3 14.7
GTEX-13QJC-0011-R10a-SM-5SI63 14.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 14.7
GTEX-13FXS-0011-R10a-SM-5J2MA 14.5
GTEX-13N1W-0011-R10b-SM-5MR4H 14.5
GTEX-N7MS-0011-R10A-SM-2HMJK 14.4
GTEX-N7MT-0011-R10A-SM-2I3E1 14.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 14.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 14.4
GTEX-13NYB-0011-R10a-SM-5KM43 14.2
GTEX-13OW6-0011-R10a-SM-5L3HE 14.1
GTEX-13OW8-0011-R10a-SM-5L3H6 14.1
GTEX-13SLX-0011-R10a-SM-5P9HV 14.1
GTEX-QDT8-0011-R10A-SM-32PKG 14.1
GTEX-X261-0011-R10B-SM-4E3JT 13.9
GTEX-13OVJ-0011-R10b-SM-5L3HT 13.8
GTEX-Z93S-0011-R10a-SM-4RGNM 13.5
GTEX-ZUA1-0011-R10a-SM-51MT6 13.1
GTEX-13O3O-0011-R10a-SM-5LUA9 13.0
GTEX-13X6I-0011-R10a-SM-5PNWI 13.0
GTEX-QMR6-0011-R10A-SM-32PKO 12.9
GTEX-13JUV-0011-R10b-SM-5LZXR 12.7
GTEX-13FLV-0011-R10b-SM-5LZZ2 12.5
GTEX-147F4-0011-R10b-SM-5S2WC 12.4
GTEX-ZVT3-0011-R10b-SM-57WB6 12.2
GTEX-13SLW-0011-R10a-SM-5S2UI 12.0
GTEX-12126-0011-R10b-SM-5BC6T 11.9
GTEX-12WSD-0011-R10b-SM-5GU79 11.9
GTEX-13G51-0011-R10b-SM-5LZYF 11.6
GTEX-OXRN-0011-R10A-SM-2I5GC 11.6
GTEX-TSE9-0011-R10A-SM-3DB7O 11.5
GTEX-145LU-0011-R10a-SM-5PNWJ 11.4
GTEX-11WQK-0011-R10a-SM-5BC6R 11.1
GTEX-1445S-0011-R10a-SM-5PNWB 10.8
GTEX-13FTZ-0011-R10b-SM-5KLZS 10.7
GTEX-RVPU-0011-R10A-SM-2XCAH 10.5
GTEX-11ZUS-0011-R10b-SM-5BC79 10.4
GTEX-NL4W-0011-R10A-SM-2I3DY 10.4
GTEX-XMD1-0011-R10A-SM-4AT4A 9.8
GTEX-11WQC-0011-R10a-SM-57WCT 9.7
GTEX-139TS-0011-R10a-SM-5K7TU 9.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 9.6
GTEX-12ZZW-0011-R10b-SM-5HL9X 9.5
GTEX-P44H-0011-R10A-SM-2XCEK 9.1
GTEX-1477Z-0011-R10b-SM-5S2RF 8.5
GTEX-12WSA-0011-R10b-SM-5P9ET 8.4
GTEX-13IVO-0011-R10a-SM-5LZY3 8.1
GTEX-OXRO-0011-R10A-SM-2I5EH 8.1
GTEX-ZV68-0011-R10a-SM-51MT7 8.1
GTEX-ZXG5-0011-R10a-SM-57WDD 8.1
GTEX-13JVG-0011-R10b-SM-5KM2P 8.0
GTEX-14753-0011-R10b-SM-5S2WE 7.9
GTEX-ZE7O-0011-R10a-SM-57WAZ 7.9
GTEX-13NZA-0011-R10b-SM-5KM54 7.0
GTEX-131XW-0011-R10a-SM-5DUVA 6.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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