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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:13.2TPM
GTEx:17.5RPKM
FANTOM5:66.3Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Medium
Cells in tubules:High
 

Antibody staining

Antibody HPA040875

 

Antibody HPA044229

 

Antibody CAB016095

 

Cells in glomeruli

Medium   Not detected   Not detected  

Cells in tubules

High   Medium   Low  
     
     
     

KIDNEY - HPA RNA-seq

Average TPM

13.2

overview Female, age 58
Sample 1
TPM: 22.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 16.6
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 15.1
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 15.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 5.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 9.7
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 13.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 13.2
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 6.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

17.5

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 17.5
Samples: 32

Max RPKM: 28.8
Min RPKM: 7.4
Std RPKM: 4.8
Median RPKM: 17.2
GTEX-1497J-0826-SM-5NQAJ 28.8
GTEX-QLQW-1626-SM-4R1K1 24.7
GTEX-12696-0926-SM-5FQTV 23.9
GTEX-ZYFG-1626-SM-5GZYY 23.7
GTEX-13NYB-1726-SM-5N9G2 22.9
GTEX-QDVN-1626-SM-48TZC 22.8
GTEX-P4QS-1126-SM-3NMD5 22.2
GTEX-UPIC-1126-SM-4IHLO 22.2
GTEX-12WSG-0826-SM-5EQ5A 21.5
GTEX-145MN-0326-SM-5QGQI 20.8
GTEX-XPVG-0526-SM-4B65N 20.2
GTEX-ZYT6-2226-SM-5GIC9 19.0
GTEX-13OVL-1826-SM-5KLZR 17.6
GTEX-ZVZP-0926-SM-5GIDB 17.6
GTEX-RN64-1626-SM-48FD7 17.4
GTEX-147F4-2626-SM-5Q5CS 17.2
GTEX-13112-2126-SM-5GCO4 17.2
GTEX-Y5V6-2026-SM-5IFHO 16.8
GTEX-N7MS-1626-SM-3LK5F 16.5
GTEX-11OF3-1326-SM-5N9FJ 15.5
GTEX-ZLFU-0926-SM-5P9F8 15.3
GTEX-1399S-0526-SM-5IJG8 15.2
GTEX-11TTK-1926-SM-5PNW8 14.1
GTEX-13OVI-1126-SM-5KLZF 14.0
GTEX-13RTJ-2226-SM-5S2Q1 13.8
GTEX-11GS4-2326-SM-5A5KS 13.7
GTEX-13OW6-1826-SM-5N9F9 13.0
GTEX-ZC5H-1726-SM-5HL7X 12.9
GTEX-T5JC-1526-SM-4DM68 12.3
GTEX-13O1R-2526-SM-5N9FW 11.1
GTEX-ZYFD-1526-SM-5NQ7T 9.4
GTEX-NPJ8-2226-SM-3TW8D 7.4
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

66.3

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 66.3
FF:10017-101C8 60,62,63 years, female 66.3

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