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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TOX3
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CANCER ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

CANCER ATLAS

Gene description

TOX high mobility group box family member 3

Protein class

Predicted intracellular proteins, Transcription factors

Protein evidence

Evidence at protein level
Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA040376

Tissue

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Tissue

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

A few cases of lung, colorectal, breast and cervical cancer displayed moderate nuclear positivity. Moderate cytoplasmic staining was observed in several cases of skin and pancreatic cancer. Remaining cancer tissues were generally negative.

GENE INFORMATION

Gene name

TOX3 (HGNC Symbol)

Synonyms

CAGF9, TNRC9

Description

TOX high mobility group box family member 3 (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene contains an HMG-box, indicating that it may be involved in bending and unwinding of DNA and alteration of chromatin structure. The C-terminus of the encoded protein is glutamine-rich due to CAG repeats in the coding sequence. A minor allele of this gene has been implicated in an elevated risk of breast cancer. Two transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Apr 2009]

Chromosome

16

Cytoband

q12.1

Chromosome location (bp)

52438005 - 52547802

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000103460 (version 83.38)

Entrez gene

27324

UniProt

O15405 (UniProt - Evidence at protein level)

neXtProt

NX_O15405

Antibodypedia

TOX3 antibodies

PROTEIN BROWSER

TOX3-002
TOX3-003
TOX3-004

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

TOX3-002
ENSP00000385705
ENST00000407228
O15405 [Direct mapping]
TOX high mobility group box family member 3
Show all
Predicted intracellular proteins
Transcription factors
   Other all-alpha-helical DNA-binding domains
Show all
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0006351 [transcription, DNA-templated]
GO:0006915 [apoptotic process]
GO:0034056 [estrogen response element binding]
GO:0042803 [protein homodimerization activity]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0051219 [phosphoprotein binding]
Show all
571 aa
63.1 kDa
No 0
TOX3-003
ENSP00000219746
ENST00000219746
O15405 [Direct mapping]
TOX high mobility group box family member 3
Show all
Predicted intracellular proteins
Transcription factors
   Other all-alpha-helical DNA-binding domains
Show all
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0006351 [transcription, DNA-templated]
GO:0006915 [apoptotic process]
GO:0034056 [estrogen response element binding]
GO:0042803 [protein homodimerization activity]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0051219 [phosphoprotein binding]
Show all
576 aa
63.3 kDa
No 0
TOX3-004
ENSP00000457401
ENST00000563091
H3BTZ9 [Direct mapping]
TOX high mobility group box family member 3
Show all
Predicted intracellular proteins
Show all
GO:0006338 [chromatin remodeling]
Show all
166 aa
17.8 kDa
No 0

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