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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:98.9TPM
GTEx:41.4RPKM
FANTOM5:128.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA048315

 

Glandular cells

Medium  
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

98.9

overview Male, age 65
Sample 1
TPM: 96.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 94.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 108.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 95.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

41.4

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 41.4
Samples: 88

Max RPKM: 70.4
Min RPKM: 27
Std RPKM: 9.3
Median RPKM: 40.3
GTEX-VUSG-1726-SM-4KKZL 70.4
GTEX-ZC5H-2326-SM-4WAYT 67.6
GTEX-UPK5-2026-SM-4JBIM 66.7
GTEX-11NSD-1726-SM-5N9C3 60.4
GTEX-X15G-1426-SM-4PQZK 59.7
GTEX-Y5LM-1626-SM-4VDTB 58.3
GTEX-133LE-1426-SM-5IFH1 56.2
GTEX-WQUQ-2426-SM-4MVNW 54.8
GTEX-Z9EW-0926-SM-5CVMM 54.0
GTEX-131XG-1726-SM-5LZUR 53.8
GTEX-11XUK-1426-SM-5EQMG 51.3
GTEX-XAJ8-0526-SM-47JYK 51.2
GTEX-ZLFU-1526-SM-4WWBT 51.0
GTEX-ZEX8-1826-SM-57WBH 49.8
GTEX-XGQ4-1326-SM-4GIDU 49.3
GTEX-1399R-2026-SM-5K7WN 48.8
GTEX-WFG8-1626-SM-4LVMB 48.7
GTEX-VJYA-0926-SM-4KL1N 48.7
GTEX-WRHK-1026-SM-4MVOD 48.6
GTEX-WFJO-0926-SM-4LVM2 48.5
GTEX-139YR-2226-SM-5IFFW 47.7
GTEX-WH7G-1626-SM-4LVMY 46.2
GTEX-ZYWO-1526-SM-5SIAL 45.8
GTEX-11I78-1126-SM-5A5K5 45.6
GTEX-13O61-1326-SM-5KM31 45.5
GTEX-ZP4G-1626-SM-57WGD 45.0
GTEX-13FH7-1226-SM-5IJFK 44.9
GTEX-ZYFG-2026-SM-5E43Y 44.9
GTEX-13CF3-1226-SM-5LZXN 44.3
GTEX-ZZ64-0526-SM-5GZXM 44.1
GTEX-XUZC-1426-SM-4BRV3 44.0
GTEX-13RTK-0826-SM-5Q5C6 43.3
GTEX-11P82-0826-SM-5P9GU 43.0
GTEX-11DXX-1626-SM-5H11H 43.0
GTEX-1192X-2526-SM-59868 42.6
GTEX-14E6E-1626-SM-5RQI7 42.4
GTEX-14DAR-1426-SM-5RQIR 42.4
GTEX-ZVP2-1726-SM-5GU5P 42.3
GTEX-1399S-2026-SM-5KM4B 41.7
GTEX-12BJ1-1926-SM-5HL9Z 41.3
GTEX-ZTPG-2626-SM-57WFX 41.2
GTEX-11DXZ-1326-SM-5H11X 40.6
GTEX-X5EB-1626-SM-4E3IV 40.5
GTEX-1399U-2126-SM-5IFEZ 40.5
GTEX-YB5E-1526-SM-5IFIE 40.2
GTEX-11P7K-1626-SM-5GU63 40.1
GTEX-13QBU-1926-SM-5IJEW 39.9
GTEX-131XF-1326-SM-5GCMQ 39.8
GTEX-13D11-0726-SM-5LZZB 39.4
GTEX-ZVT2-2126-SM-5NQ93 39.2
GTEX-13FTW-2026-SM-5IJE2 39.0
GTEX-13113-1226-SM-5EGHT 38.5
GTEX-145ME-0926-SM-5O9AR 38.1
GTEX-XBED-1426-SM-4AT4G 37.9
GTEX-ZQG8-2526-SM-57WEQ 37.8
GTEX-11VI4-1626-SM-5EQKO 37.6
GTEX-148VJ-2226-SM-5NQ9M 36.8
GTEX-11EQ9-1326-SM-5985X 36.7
GTEX-ZA64-1226-SM-5HL7B 36.5
GTEX-13111-1426-SM-5DUW3 36.4
GTEX-WFG7-1726-SM-4LVME 35.9
GTEX-139T6-1026-SM-5IJGC 35.6
GTEX-ZXES-1526-SM-5NQ95 35.6
GTEX-ZTX8-0526-SM-59HLD 35.3
GTEX-XMK1-1826-SM-4B66F 34.9
GTEX-ZF2S-1726-SM-57WFT 34.9
GTEX-XXEK-1026-SM-4BRUW 33.9
GTEX-ZPIC-2326-SM-57WDW 33.6
GTEX-YF7O-1826-SM-5IFIU 33.4
GTEX-Y9LG-1626-SM-5IFHM 33.2
GTEX-145LT-1026-SM-5LU9O 32.6
GTEX-ZVZP-1826-SM-5GZXB 32.5
GTEX-117YX-0326-SM-5GICL 32.2
GTEX-Y114-1426-SM-4TT6W 31.8
GTEX-13PL7-2626-SM-5IFH4 31.8
GTEX-YEC4-1726-SM-4W21E 31.6
GTEX-13OVI-1926-SM-5IJCG 31.0
GTEX-ZPCL-1726-SM-57WEO 30.9
GTEX-ZLV1-1126-SM-4WWBW 30.7
GTEX-ZTSS-0926-SM-59865 30.2
GTEX-111CU-1326-SM-5NQ8L 30.1
GTEX-111YS-1426-SM-5GID8 29.9
GTEX-13O21-1026-SM-5IJDU 29.8
GTEX-Y3IK-1726-SM-4YCCR 27.7
GTEX-ZQUD-0926-SM-57WE3 27.6
GTEX-WEY5-1526-SM-4LMJF 27.3
GTEX-12WSK-1526-SM-5CVNO 27.2
GTEX-1122O-1326-SM-5H11F 27.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

128.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 128.0
FF:10024-101D6 15,40,85 years, mixed 128.0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.