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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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SLC6A2
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA004057

 

Antibody CAB078195

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA004057   AMAb91116  

Host species

Rabbit   Mouse  

Clonality

pAb   mAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Protein A/G  

Other gene match

   

Released in version

3   16  

References

   

VALIDATION SUMMARY

 
 

Antibody HPA004057

 

Antibody CAB078195

 
Immunocytochemistry

Uncertain    
Immunohistochemistry

  Supported  
Western blot

Supported    
Protein array

Supported    

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA004057

 

Antibody CAB078195

 

Standard validation

Uncertain    

   

Figure description

Immunofluorescent staining of human cell line SH-SY5Y shows localization to cytosol.    

Antibody dilution

1:43    

Literature conformity

The subcellular location is not consistent with literature.    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA004057

 

Antibody CAB078195

 

Standard validation

  Supported  

   

Figure description

  Immunohistochemical staining of human cerebral cortex shows positivity in neuronal processes.  

Expression

  RNA: detected in 7 tissues
Protein: detected in 5 cell types
 

Retrieval

  HIER pH6  

Antibody dilution

  1:300  

Literature conformity

  Consistent with extensive gene/protein characterization data.  

RNA consistency

  Mainly consistent with RNA expression data.  
 

Standard validation

  Supported  

   

Figure description

  Noradrenergic fibers arising from the locus coeruleas innervating the entire brain.  

WESTERN BLOT

 
 

Antibody HPA004057

 

Antibody CAB078195

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
   

   

Figure description

Lane 1: Marker [kDa] 230, 110, 82, 49.3, 32.2, 25.5, 17.6
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
   

Target mass (kDa)

70.5, 69.3, 67.7, 64.3, 62.9, 57.4, 33.2    

Antibody dilution

1:250    

PROTEIN ARRAY

 
 

Antibody HPA004057

 

Antibody CAB078195

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
   

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:3000    

ANTIGEN INFORMATION

 
 

Antibody HPA004057

 

Antibody CAB078195

 

Antigen

Recombinant protein fragment   Recombinant protein  

Length (aa)

72    

Antigen sequence

SLYYLFSSFTLNLPWTDCGHTWNSPNCTDPKLLNGSVLGNHTKYSKYKFT
PAAEFYERGVLHLHESSGIHDI
   

Matching transcripts

SLC6A2-001 - ENSP00000369237 [100%]
SLC6A2-003 - ENSP00000394956 [100%]
SLC6A2-004 - ENSP00000457473 [100%]
SLC6A2-005 - ENSP00000457375 [100%]
SLC6A2-006 - ENSP00000456210 [100%]
SLC6A2-007 - ENSP00000454439 [100%]
SLC6A2-009 - ENSP00000456377 [100%]
SLC6A2-201 - ENSP00000219833 [100%]
   

Other gene match

   
ANTIGEN VIEW
SLC6A2-001
SLC6A2-003
SLC6A2-004
SLC6A2-005
SLC6A2-006
SLC6A2-007
SLC6A2-009
SLC6A2-201
 

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.