Tissue expression of SCG3 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	279.1	TPM
GTEx:	78.3	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glial cells:	Low
Neuronal cells:	High
Neuropil:	Low

Antibody staining	Antibody HPA006880	Antibody HPA053715	Antibody CAB033274
Endothelial cells	Not detected	Not detected	Not detected
Glial cells	Low	Not detected	Not detected
Neuronal cells	High	Not detected	Not detected
Neuropil	Low	Low	Not detected

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	279.1

Male, age 5

Sample 1
TPM: 200.2

Female, age 40

Sample 2
TPM: 465.5

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 171.7

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	78.3

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 72.5

Samples: 114

Max RPKM: 116.9
Min RPKM: 22.2
Std RPKM: 17.9
Median RPKM: 73.7

GTEX-TSE9-3026-SM-3DB76

116.9

GTEX-13OVJ-2826-SM-5L3GW

114.0

GTEX-11NUK-2926-SM-5A5MD

110.3

GTEX-RU72-3026-SM-5SI7Y

102.9

GTEX-QMR6-1426-SM-32PLA

100.7

GTEX-12ZZZ-3026-SM-5BC67

99.1

GTEX-QVJO-1426-SM-2S1QY

97.6

GTEX-12WSD-3126-SM-5HL7P

96.6

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 84.3

Samples: 108

Max RPKM: 180.3
Min RPKM: 28.2
Std RPKM: 22.9
Median RPKM: 80

GTEX-13OVJ-0011-R10b-SM-5L3HT

180.3

GTEX-QVUS-0011-R10A-SM-3GIK3

140.0

GTEX-1445S-0011-R10a-SM-5PNWB

139.1

GTEX-12ZZY-0011-R10b-SM-5HL7W

129.7

GTEX-11H98-0011-R10b-SM-5NQ98

129.4

GTEX-12WSD-0011-R10b-SM-5GU79

124.9

GTEX-13OW8-0011-R10a-SM-5L3H6

123.3

GTEX-TSE9-0011-R10A-SM-3DB7O

119.4

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue