Tissue expression of SCG3 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	2.2	TPM
GTEx:	0.6	RPKM
FANTOM5:	4.8	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Low

Antibody staining	Antibody HPA006880	Antibody HPA053715	Antibody CAB033274
Glandular cells	Not detected	Not detected	Medium

SMALL INTESTINE - HPA RNA-seq

Average TPM	2.2

Male, age 65

Sample 1
TPM: 1.8

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 1.7

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 2.9

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 2.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	0.6

GTEx sample id

RPKM

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 0.6

Samples: 88

Max RPKM: 2.9
Min RPKM: 0.1
Std RPKM: 0.5
Median RPKM: 0.5

GTEX-1192X-2526-SM-59868

2.9

GTEX-Y3IK-1726-SM-4YCCR

2.3

GTEX-117YX-0326-SM-5GICL

2.2

GTEX-WEY5-1526-SM-4LMJF

2.1

GTEX-ZQUD-0926-SM-57WE3

1.7

GTEX-13111-1426-SM-5DUW3

1.7

GTEX-13O21-1026-SM-5IJDU

1.6

GTEX-13QBU-1926-SM-5IJEW

1.5

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	4.8

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 4.8

FF:10024-101D6

15,40,85 years, mixed

4.8