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Term
Gene name

Class

Subclass

Chromosome

External id

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Reliability

Reliability

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Method

Validation

Method

Validation

Method

Validation

Location

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Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA003412

 

Antibody CAB009335

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Santa Cruz Biotechnology
 

Product name

HPA003412   sc-15346  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Protein A/G  

Other gene match

   

Released in version

4   4  

References

1    

VALIDATION SUMMARY

 
 

Antibody HPA003412

 

Antibody CAB009335

 
Immunocytochemistry

Approved    
Immunohistochemistry


Validated
  Supported  
Western blot

Supported   Supported  
Protein array

Supported    

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA003412

 

Antibody CAB009335

 

Standard validation

Approved    

   

Figure description

Immunofluorescent staining of human cell line A-431 shows localization to actin filaments.    

Antibody dilution

1:47    

Literature conformity

The subcellular location is partly supported by literature or no literature is available.    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA003412

 

Antibody CAB009335

 

Formal validation: Orthogonal

Validated

Pearson correlation >0.6 for protein and RNA expression in cell lines.
   

 

 

   

Figure description

Distribution of protein expression (antibody staining) and RNA expression (TPM) across 44 cell lines.    
 

Standard validation

Supported   Supported  

   

Figure description

Immunohistochemical staining of human duodenum shows strong positivity in plasma.   Immunohistochemical staining of human duodenum shows strong positivity in plasma.  

Expression

RNA: detected in 36 tissues
Protein: detected in 16 cell types
  RNA: detected in 36 tissues
Protein: detected in 75 cell types
 

Retrieval

HIER pH6   HIER pH6  

Antibody dilution

1:50   1:25  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Not consistent with RNA expression data.   Not consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA003412

 

Antibody CAB009335

 

Standard validation

Supported

Single band corresponding to the predicted size in kDa (+/-20%).
  Supported

Analysis performed using a standard panel of samples.
Single band corresponding to the predicted size in kDa (+/-20%).
 

   

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: Negative control (vector only transfected HEK293T lysate)
Lane 3: Over-expression Lysate (Co-expressed with a C-terminal myc-DDK tag (~3.1 kDa) in mammalian HEK293T cells, LY400338)
  Lane 1: Marker [kDa] 219, 111, 83, 48, 32, 26, 17
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

62.9, 57.4, 55.9, 53, 49.1   62.9, 57.4, 55.9, 53, 49.1, 20.1, 17.7  

Antibody dilution

1:250   1:500  

PROTEIN ARRAY

 
 

Antibody HPA003412

 

Antibody CAB009335

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
   

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:3000    

ANTIGEN INFORMATION

 
 

Antibody HPA003412

 

Antibody CAB009335

 

Antigen

Recombinant protein fragment   Recombinant protein  

Length (aa)

120    

Antigen sequence

KYSSEFCSTPACSEGNSDCYFGNGSAYRGTHSLTESGASCLPWNSMILIG
KVYTAQNPSAQALGLGKHNYCRNPDGDAKPWCHVLKNRRLTWEYCDVPSC
STCGLRQYSQPQFRIKGGLF
   

Matching transcripts

PLAT-001 - ENSP00000220809 [100%]
PLAT-002 - ENSP00000270188 [100%]
PLAT-003 - ENSP00000392045 [100%]
PLAT-005 - ENSP00000428886 [100%]
PLAT-004 - ENSP00000429401 [88%]
PLAT-006 - ENSP00000407861 [88%]
   

Other gene match

   
ANTIGEN VIEW
PLAT-001
PLAT-002
PLAT-003
PLAT-004
PLAT-005
PLAT-006

RELEVANT PUBLICATIONS

 
 

Antibody HPA003412

 

Antibody CAB009335

 

1.

Variance decomposition of protein profiles from antibody arrays using a longitudinal twin model
Kato BS et al
Proteome Sci 2011;9:73
   
 

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