Tissue expression of SQLE - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	8.5	TPM
GTEx:	4.5	RPKM
FANTOM5:	8.3	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	High
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA018038	Antibody HPA020762
Adipocytes	Not detected	Not detected
Fibroblasts	High	Not detected
Peripheral nerve	Not detected	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	High
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA018038	Antibody HPA020762
Adipocytes	Not detected	Not detected
Fibroblasts	High	Not detected
Peripheral nerve	Not detected	Low

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	8.5

Female, age 80

Sample 1
TPM: 3.2

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 3.0

Female, age 57

Sample 3
TPM: 3.1

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 24.1

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 9.1

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	4.5

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 4.4

Samples: 350

Max RPKM: 17.4
Min RPKM: 0.8
Std RPKM: 2.6
Median RPKM: 3.6

GTEX-ZYVF-0226-SM-5GIEG

17.4

GTEX-X4XY-0326-SM-46MVZ

15.9

GTEX-ZDXO-2426-SM-5S2NJ

15.5

GTEX-12584-0226-SM-5EQL5

15.1

GTEX-POMQ-2326-SM-5S2VS

14.5

GTEX-11EQ8-0226-SM-5EQ5G

14.2

GTEX-13JVG-0226-SM-5J1MW

14.2

GTEX-R55F-1426-SM-2TF53

14.0

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Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 4.8

Samples: 227

Max RPKM: 28.4
Min RPKM: 1
Std RPKM: 3.2
Median RPKM: 3.9

GTEX-1339X-0726-SM-5L3FF

28.4

GTEX-12584-2126-SM-5FQUM

18.1

GTEX-11XUK-1726-SM-5GU61

17.2

GTEX-U8XE-1926-SM-3DB98

13.2

GTEX-ZYW4-2226-SM-5GZYG

12.1

GTEX-1399S-1426-SM-5PNYQ

12.0

GTEX-13S86-0926-SM-5SI6I

11.9

GTEX-13U4I-1726-SM-5J1MF

11.4

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ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	8.3

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 8.3

FF:10010-101C1

65,65,76 years, mixed

8.3