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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:25.5TPM
GTEx:14.7RPKM
FANTOM5:54.8Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA039129

 

Antibody HPA050570

 

Glandular cells

High   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

25.5

overview Male, age 65
Sample 1
TPM: 20.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 29.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 27.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 24.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

14.7

GTEx sample id

RPKM

12.614.416.58.921.70246810121416182022
 
12.614.416.58.921.70246810121416182022

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 14.7
Samples: 88

Max RPKM: 22.9
Min RPKM: 8.9
Std RPKM: 2.8
Median RPKM: 14.4
GTEX-VUSG-1726-SM-4KKZL 22.9
GTEX-131XG-1726-SM-5LZUR 21.7
GTEX-148VJ-2226-SM-5NQ9M 21.3
GTEX-UPK5-2026-SM-4JBIM 21.0
GTEX-ZLFU-1526-SM-4WWBT 20.1
GTEX-139YR-2226-SM-5IFFW 19.8
GTEX-12BJ1-1926-SM-5HL9Z 19.3
GTEX-WFJO-0926-SM-4LVM2 19.2
GTEX-ZP4G-1626-SM-57WGD 18.9
GTEX-WH7G-1626-SM-4LVMY 18.7
GTEX-WRHK-1026-SM-4MVOD 18.3
GTEX-11VI4-1626-SM-5EQKO 17.9
GTEX-145ME-0926-SM-5O9AR 17.7
GTEX-1192X-2526-SM-59868 17.7
GTEX-111CU-1326-SM-5NQ8L 17.5
GTEX-WFG8-1626-SM-4LVMB 17.4
GTEX-1399U-2126-SM-5IFEZ 17.4
GTEX-XGQ4-1326-SM-4GIDU 17.2
GTEX-ZEX8-1826-SM-57WBH 16.8
GTEX-ZVP2-1726-SM-5GU5P 16.8
GTEX-11P82-0826-SM-5P9GU 16.7
GTEX-Z9EW-0926-SM-5CVMM 16.5
GTEX-13O61-1326-SM-5KM31 16.5
GTEX-11XUK-1426-SM-5EQMG 16.3
GTEX-XAJ8-0526-SM-47JYK 16.1
GTEX-11NSD-1726-SM-5N9C3 16.1
GTEX-11P7K-1626-SM-5GU63 15.8
GTEX-ZC5H-2326-SM-4WAYT 15.6
GTEX-11EQ9-1326-SM-5985X 15.6
GTEX-ZVT2-2126-SM-5NQ93 15.5
GTEX-ZTPG-2626-SM-57WFX 15.4
GTEX-WQUQ-2426-SM-4MVNW 15.3
GTEX-XXEK-1026-SM-4BRUW 15.2
GTEX-Y5LM-1626-SM-4VDTB 15.2
GTEX-117YX-0326-SM-5GICL 15.2
GTEX-ZYWO-1526-SM-5SIAL 15.2
GTEX-13RTK-0826-SM-5Q5C6 14.9
GTEX-11I78-1126-SM-5A5K5 14.9
GTEX-11DXZ-1326-SM-5H11X 14.9
GTEX-1399R-2026-SM-5K7WN 14.8
GTEX-139T6-1026-SM-5IJGC 14.7
GTEX-14E6E-1626-SM-5RQI7 14.6
GTEX-13QBU-1926-SM-5IJEW 14.5
GTEX-13111-1426-SM-5DUW3 14.5
GTEX-X15G-1426-SM-4PQZK 14.4
GTEX-131XF-1326-SM-5GCMQ 14.4
GTEX-13FH7-1226-SM-5IJFK 14.2
GTEX-Y3IK-1726-SM-4YCCR 14.1
GTEX-ZPCL-1726-SM-57WEO 13.9
GTEX-ZXES-1526-SM-5NQ95 13.8
GTEX-145LT-1026-SM-5LU9O 13.8
GTEX-13OVI-1926-SM-5IJCG 13.8
GTEX-ZQG8-2526-SM-57WEQ 13.8
GTEX-XUZC-1426-SM-4BRV3 13.8
GTEX-1399S-2026-SM-5KM4B 13.8
GTEX-ZZ64-0526-SM-5GZXM 13.7
GTEX-12WSK-1526-SM-5CVNO 13.7
GTEX-13O21-1026-SM-5IJDU 13.7
GTEX-ZQUD-0926-SM-57WE3 13.4
GTEX-XBED-1426-SM-4AT4G 13.3
GTEX-13113-1226-SM-5EGHT 13.2
GTEX-13CF3-1226-SM-5LZXN 13.1
GTEX-VJYA-0926-SM-4KL1N 13.0
GTEX-ZTX8-0526-SM-59HLD 12.8
GTEX-YB5E-1526-SM-5IFIE 12.6
GTEX-WFG7-1726-SM-4LVME 12.6
GTEX-ZF2S-1726-SM-57WFT 12.5
GTEX-WEY5-1526-SM-4LMJF 12.5
GTEX-ZPIC-2326-SM-57WDW 12.3
GTEX-133LE-1426-SM-5IFH1 12.3
GTEX-ZYFG-2026-SM-5E43Y 12.2
GTEX-ZLV1-1126-SM-4WWBW 12.1
GTEX-13FTW-2026-SM-5IJE2 12.0
GTEX-ZVZP-1826-SM-5GZXB 11.8
GTEX-Y114-1426-SM-4TT6W 11.7
GTEX-XMK1-1826-SM-4B66F 11.7
GTEX-11DXX-1626-SM-5H11H 11.7
GTEX-X5EB-1626-SM-4E3IV 11.5
GTEX-ZTSS-0926-SM-59865 11.5
GTEX-14DAR-1426-SM-5RQIR 11.4
GTEX-ZA64-1226-SM-5HL7B 11.1
GTEX-13PL7-2626-SM-5IFH4 11.1
GTEX-YEC4-1726-SM-4W21E 10.8
GTEX-YF7O-1826-SM-5IFIU 10.7
GTEX-Y9LG-1626-SM-5IFHM 10.2
GTEX-13D11-0726-SM-5LZZB 10.1
GTEX-1122O-1326-SM-5H11F 9.6
GTEX-111YS-1426-SM-5GID8 8.9
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

54.8

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 54.8
FF:10024-101D6 15,40,85 years, mixed 54.8

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.