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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:2.7TPM
GTEx:16.0RPKM
FANTOM5:1.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA053841

 

Antibody HPA059622

 

Glandular cells

Low   Not detected  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

2.7

overview Male, age 65
Sample 1
TPM: 1.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 4.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 2.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 2.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

16.0

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 16.0
Samples: 88

Max RPKM: 90.7
Min RPKM: 0.7
Std RPKM: 18.5
Median RPKM: 7.9
GTEX-ZC5H-2326-SM-4WAYT 90.7
GTEX-WRHK-1026-SM-4MVOD 72.3
GTEX-VUSG-1726-SM-4KKZL 68.4
GTEX-11VI4-1626-SM-5EQKO 61.7
GTEX-UPK5-2026-SM-4JBIM 52.5
GTEX-WH7G-1626-SM-4LVMY 51.7
GTEX-13O61-1326-SM-5KM31 51.4
GTEX-11NSD-1726-SM-5N9C3 49.0
GTEX-WFJO-0926-SM-4LVM2 47.8
GTEX-X15G-1426-SM-4PQZK 47.0
GTEX-148VJ-2226-SM-5NQ9M 40.0
GTEX-11P82-0826-SM-5P9GU 38.0
GTEX-13FH7-1226-SM-5IJFK 36.0
GTEX-12BJ1-1926-SM-5HL9Z 33.0
GTEX-ZEX8-1826-SM-57WBH 32.6
GTEX-13QBU-1926-SM-5IJEW 31.6
GTEX-11XUK-1426-SM-5EQMG 26.9
GTEX-1399U-2126-SM-5IFEZ 26.3
GTEX-ZLFU-1526-SM-4WWBT 25.8
GTEX-131XG-1726-SM-5LZUR 25.2
GTEX-14E6E-1626-SM-5RQI7 24.9
GTEX-Z9EW-0926-SM-5CVMM 22.2
GTEX-145ME-0926-SM-5O9AR 20.3
GTEX-11DXZ-1326-SM-5H11X 19.8
GTEX-ZVP2-1726-SM-5GU5P 18.5
GTEX-ZP4G-1626-SM-57WGD 17.4
GTEX-1399S-2026-SM-5KM4B 16.5
GTEX-WEY5-1526-SM-4LMJF 14.1
GTEX-11DXX-1626-SM-5H11H 14.0
GTEX-145LT-1026-SM-5LU9O 12.9
GTEX-11P7K-1626-SM-5GU63 12.8
GTEX-11I78-1126-SM-5A5K5 12.6
GTEX-ZYWO-1526-SM-5SIAL 12.2
GTEX-WFG8-1626-SM-4LVMB 11.8
GTEX-139T6-1026-SM-5IJGC 11.3
GTEX-XAJ8-0526-SM-47JYK 10.7
GTEX-ZVT2-2126-SM-5NQ93 10.7
GTEX-ZZ64-0526-SM-5GZXM 9.6
GTEX-XGQ4-1326-SM-4GIDU 9.2
GTEX-13CF3-1226-SM-5LZXN 9.0
GTEX-WQUQ-2426-SM-4MVNW 9.0
GTEX-11EQ9-1326-SM-5985X 8.7
GTEX-131XF-1326-SM-5GCMQ 8.5
GTEX-13113-1226-SM-5EGHT 8.0
GTEX-X5EB-1626-SM-4E3IV 7.7
GTEX-Y5LM-1626-SM-4VDTB 7.4
GTEX-12WSK-1526-SM-5CVNO 7.4
GTEX-133LE-1426-SM-5IFH1 7.3
GTEX-ZQG8-2526-SM-57WEQ 6.9
GTEX-ZXES-1526-SM-5NQ95 6.4
GTEX-139YR-2226-SM-5IFFW 6.3
GTEX-13O21-1026-SM-5IJDU 6.2
GTEX-13111-1426-SM-5DUW3 6.1
GTEX-Y114-1426-SM-4TT6W 5.6
GTEX-ZTX8-0526-SM-59HLD 5.5
GTEX-ZTPG-2626-SM-57WFX 5.2
GTEX-ZYFG-2026-SM-5E43Y 4.9
GTEX-XUZC-1426-SM-4BRV3 4.7
GTEX-ZPIC-2326-SM-57WDW 4.7
GTEX-13D11-0726-SM-5LZZB 4.7
GTEX-13RTK-0826-SM-5Q5C6 4.5
GTEX-13OVI-1926-SM-5IJCG 4.2
GTEX-1399R-2026-SM-5K7WN 4.1
GTEX-ZLV1-1126-SM-4WWBW 4.0
GTEX-ZF2S-1726-SM-57WFT 3.9
GTEX-XBED-1426-SM-4AT4G 3.8
GTEX-ZTSS-0926-SM-59865 3.6
GTEX-ZA64-1226-SM-5HL7B 3.5
GTEX-13PL7-2626-SM-5IFH4 3.4
GTEX-VJYA-0926-SM-4KL1N 3.2
GTEX-1192X-2526-SM-59868 3.2
GTEX-Y3IK-1726-SM-4YCCR 3.1
GTEX-Y9LG-1626-SM-5IFHM 3.0
GTEX-XMK1-1826-SM-4B66F 3.0
GTEX-WFG7-1726-SM-4LVME 2.9
GTEX-XXEK-1026-SM-4BRUW 2.9
GTEX-14DAR-1426-SM-5RQIR 2.8
GTEX-YB5E-1526-SM-5IFIE 2.8
GTEX-YF7O-1826-SM-5IFIU 2.7
GTEX-13FTW-2026-SM-5IJE2 2.5
GTEX-ZVZP-1826-SM-5GZXB 2.3
GTEX-ZQUD-0926-SM-57WE3 2.1
GTEX-1122O-1326-SM-5H11F 1.9
GTEX-YEC4-1726-SM-4W21E 1.8
GTEX-111CU-1326-SM-5NQ8L 1.7
GTEX-111YS-1426-SM-5GID8 1.5
GTEX-ZPCL-1726-SM-57WEO 1.3
GTEX-117YX-0326-SM-5GICL 0.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

1.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 1.3
FF:10024-101D6 15,40,85 years, mixed 1.3

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.