We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PDCD5
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:21.6RPKM
FANTOM5:166.2Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA018471

 

Glial cells

Not detected  

Neuronal cells

Not detected  
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

21.6

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 21.6
Samples: 117

Max RPKM: 36.7
Min RPKM: 6.8
Std RPKM: 5.6
Median RPKM: 22.2
GTEX-T2IS-0011-R5A-SM-32QP4 36.7
GTEX-P44H-0011-R5A-SM-2XCEX 35.9
GTEX-139TT-0011-R5b-SM-5K7W8 35.5
GTEX-132Q8-0011-R5a-SM-5IJDM 32.8
GTEX-TSE9-0011-R5A-SM-3DB7J 29.8
GTEX-WWYW-0011-R5A-SM-3NB3E 29.4
GTEX-13O3O-0011-R5b-SM-5KM44 29.3
GTEX-ZUA1-0011-R5b-SM-51MTG 28.8
GTEX-13X6K-0011-R5b-SM-5PNUE 28.0
GTEX-OHPN-0011-R5A-SM-2I5FF 27.7
GTEX-QVJO-0011-R5A-SM-2S1QM 27.7
GTEX-S7SE-0011-R5A-SM-2XCDA 27.5
GTEX-12WSC-0011-R5b-SM-5CVNS 27.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 27.4
GTEX-14ABY-0011-R5b-SM-5SI7B 27.4
GTEX-14BIM-0011-R5b-SM-5S2RM 27.4
GTEX-X585-0011-R5A-SM-46MVI 27.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 27.1
GTEX-1399T-0011-R5b-SM-5IJDK 27.1
GTEX-12WSF-0011-R5a-SM-5HL8K 26.9
GTEX-13NYS-0011-R5a-SM-5MR4D 26.9
GTEX-11H98-0011-R5b-SM-57WCF 26.8
GTEX-QMR6-0011-R5A-SM-32PKT 26.6
GTEX-T6MN-0011-R5A-SM-32QPD 26.5
GTEX-1313W-0011-R5b-SM-5L3EP 26.3
GTEX-13CZV-0011-R5a-SM-5K7XA 26.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 26.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 25.7
GTEX-11NV4-0011-R5a-SM-5NQ88 25.5
GTEX-13FLV-0011-R5a-SM-5LZWT 25.5
GTEX-13FLW-0011-R5a-SM-5LZX6 25.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 25.3
GTEX-WVLH-0011-R5A-SM-3MJFW 25.0
GTEX-11GSP-0011-R5a-SM-57WBE 24.6
GTEX-R55E-0011-R5A-SM-2TC5N 24.3
GTEX-131YS-0011-R5b-SM-5K7YB 24.1
GTEX-N7MT-0011-R5a-SM-2I3G6 24.1
GTEX-XMD1-0011-R5A-SM-4AT47 24.1
GTEX-RVPU-0011-R5A-SM-2XCAD 23.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 23.6
GTEX-12WSA-0011-R5b-SM-5GU5I 23.5
GTEX-WZTO-0011-R5B-SM-3NMC5 23.5
GTEX-13OW6-0011-R5a-SM-5O9BK 23.4
GTEX-WHSE-0011-R5A-SM-3P5ZO 23.4
GTEX-WL46-0011-R5A-SM-3LK6V 23.4
GTEX-13JUV-0011-R5a-SM-5LZY5 23.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 23.3
GTEX-13SLX-0011-R5a-SM-5O9BV 23.3
GTEX-13G51-0011-R5a-SM-5L3EB 23.2
GTEX-Z93S-0011-R5b-SM-4RGNI 23.1
GTEX-13OVL-0011-R5b-SM-5L3FU 23.0
GTEX-12WSB-0011-R5b-SM-5GU67 22.7
GTEX-T5JC-0011-R5A-SM-32PLK 22.7
GTEX-11OF3-0011-R5a-SM-57WB4 22.5
GTEX-RVPV-0011-R5A-SM-2TF69 22.5
GTEX-13VXU-0011-R5a-SM-5O9D7 22.4
GTEX-145MH-0011-R5a-SM-5P9JT 22.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 22.3
GTEX-ZE7O-0011-R5a-SM-57WBO 22.2
GTEX-13FXS-0011-R5b-SM-5LZYE 22.0
GTEX-144GO-0011-R5a-SM-5PNUR 21.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 21.6
GTEX-N7MS-0011-R5a-SM-2HMK8 21.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 21.6
GTEX-13NYB-0011-R5a-SM-5MR45 21.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 21.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 21.1
GTEX-13X6J-0011-R5b-SM-5PNWT 21.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 21.0
GTEX-13X6I-0011-R5a-SM-5PNWW 20.8
GTEX-NL4W-0011-R5a-SM-2I3GD 20.8
GTEX-UTHO-0011-R5A-SM-3GIJD 20.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 20.8
GTEX-12ZZX-0011-R5a-SM-5HL89 20.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 20.7
GTEX-145LS-0011-R5a-SM-5SI65 20.7
GTEX-12WSD-0011-R5b-SM-5CVNG 20.6
GTEX-13OW7-0011-R5b-SM-5O9DM 20.3
GTEX-XOTO-0011-R5A-SM-4B657 20.3
GTEX-YFC4-0011-R5a-SM-4RGLR 20.1
GTEX-13OW5-0011-R5b-SM-5L3FR 20.0
GTEX-PVOW-0011-R5A-SM-32PL7 20.0
GTEX-13OVH-0011-R5b-SM-5KM4L 19.5
GTEX-14BIN-0011-R5b-SM-5SI78 19.2
GTEX-ZXG5-0011-R5b-SM-57WBN 18.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 18.8
GTEX-RU72-0011-R5A-SM-2TF6U 18.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 18.0
GTEX-NPJ7-0011-R5a-SM-33HBK 17.8
GTEX-13CIG-0011-R5b-SM-5L3F2 17.4
GTEX-13S7M-0011-R5b-SM-5P9HS 17.4
GTEX-13JVG-0011-R5a-SM-5MR4O 17.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 17.1
GTEX-139T8-0011-R5b-SM-5J1MO 16.7
GTEX-X4XX-0011-R5A-SM-46MWN 16.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 16.4
GTEX-X261-0011-R5A-SM-3NMB4 16.1
GTEX-139TS-0011-R5b-SM-5J2MZ 15.5
GTEX-11WQC-0011-R5a-SM-5BC74 15.1
GTEX-ZV68-0011-R5a-SM-4YCDW 14.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 14.8
GTEX-12WSH-0011-R5b-SM-5P9F3 14.7
GTEX-144GL-0011-R5b-SM-5PNUJ 14.6
GTEX-NL3H-0011-R5a-SM-2I3GB 14.4
GTEX-ZVT3-0011-R5a-SM-51MSI 14.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 14.3
GTEX-OXRN-0011-R5A-SM-2I5EF 14.3
GTEX-YJ89-0011-R5a-SM-4V6GM 13.8
GTEX-1445S-0011-R5a-SM-5PNUS 13.5
GTEX-13FHP-0011-R5b-SM-5LZY2 11.7
GTEX-13112-0011-R5b-SM-5DUV8 11.4
GTEX-1477Z-0011-R5b-SM-5PNUO 10.6
GTEX-11UD1-0011-R5b-SM-5P9FP 10.5
GTEX-S7PM-0011-R5A-SM-3NM8G 10.4
GTEX-13CF2-0011-R5a-SM-5LZWS 10.3
GTEX-145MG-0011-R5b-SM-5S2VU 7.9
GTEX-13NZA-0011-R5b-SM-5KM4K 6.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

166.2

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 166.2
FF:10379-105H1 89 years, female 190.2
FF:10164-103B2 76 years, female 142.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.