We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PDCD5
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:36.2TPM
GTEx:14.4RPKM
FANTOM5:158.9Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Not detected
 

Antibody staining

Antibody HPA018471

 

Bile duct cells

Not detected  

Hepatocytes

Not detected  
 
 
 

LIVER - HPA RNA-seq

Average TPM

36.2

N/A Female, age 60
Sample 1
TPM: 53.1
overview Male, age 54
Sample 2
TPM: 50.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 50.5
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 24.8
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 30.6
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 30.1
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 26.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 40.4
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 24.5
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 31.2
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

14.4

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 14.4
Samples: 119

Max RPKM: 33.4
Min RPKM: 5.9
Std RPKM: 4.3
Median RPKM: 13.4
GTEX-13N11-0926-SM-5IJG2 33.4
GTEX-S32W-1926-SM-4AD63 25.6
GTEX-ZYY3-0626-SM-5NQ6W 25.0
GTEX-12WSG-0626-SM-5FQTQ 24.4
GTEX-14C38-1526-SM-5RQJ7 22.7
GTEX-12696-0826-SM-5EGGE 22.4
GTEX-UTHO-2426-SM-4JBHD 21.9
GTEX-ZAB4-0826-SM-5LU9D 21.4
GTEX-ZTPG-1426-SM-51MT3 21.0
GTEX-13SLX-1226-SM-5S2Q6 20.7
GTEX-131XE-0326-SM-5LZVO 20.6
GTEX-145MO-2326-SM-5NQ9K 20.1
GTEX-147F4-1426-SM-5LUA8 20.0
GTEX-1497J-0726-SM-5Q5D1 19.6
GTEX-1269C-0626-SM-5FQSS 19.5
GTEX-13NZ9-1326-SM-5MR3V 19.2
GTEX-YECK-1926-SM-4W21H 19.2
GTEX-13NYB-1026-SM-5IFH3 19.0
GTEX-X4XY-1626-SM-46MVN 18.8
GTEX-144GM-1326-SM-5LU5E 18.3
GTEX-ZVT4-0626-SM-5E45T 18.2
GTEX-YFC4-1526-SM-5IFJS 17.8
GTEX-139TU-0826-SM-5IJFG 17.4
GTEX-139YR-0226-SM-5IFEM 17.1
GTEX-QEG4-1826-SM-4R1JN 17.1
GTEX-1399T-0826-SM-5IFES 17.0
GTEX-11NV4-1326-SM-5HL6V 16.9
GTEX-T6MN-1226-SM-3NMA5 16.6
GTEX-SJXC-1226-SM-4DM78 16.5
GTEX-RU72-1426-SM-46MUF 16.4
GTEX-13OW6-2626-SM-5IFF2 16.2
GTEX-12WSL-0226-SM-5CVMJ 16.1
GTEX-146FH-1526-SM-5NQBU 16.1
GTEX-131YS-1626-SM-5HL6C 16.0
GTEX-RTLS-1326-SM-46MUN 16.0
GTEX-13113-1326-SM-5GCOI 15.8
GTEX-13O3O-1826-SM-5IFGW 15.7
GTEX-11OF3-0726-SM-5BC4Z 15.6
GTEX-X4EO-1126-SM-4QARQ 15.6
GTEX-13FLV-0326-SM-5N9DJ 15.4
GTEX-12KS4-1326-SM-5LUB3 15.2
GTEX-13112-1426-SM-5EGH8 15.2
GTEX-P78B-1326-SM-3P611 15.2
GTEX-RN64-1826-SM-48FDV 15.1
GTEX-12WSM-0726-SM-5GCOW 15.0
GTEX-ZPU1-0826-SM-57WG2 15.0
GTEX-YB5E-0326-SM-5IFHU 14.9
GTEX-11ZVC-0726-SM-5FQT9 14.8
GTEX-13N2G-0926-SM-5IFGJ 14.8
GTEX-Q2AG-1126-SM-48U1P 14.7
GTEX-RNOR-1426-SM-48FDJ 14.7
GTEX-XOTO-0826-SM-4B65O 14.7
GTEX-11WQC-0726-SM-5EQMR 14.6
GTEX-11GSP-0626-SM-5986T 14.5
GTEX-145MF-0826-SM-5QGQA 14.5
GTEX-139TS-1426-SM-5IFJD 14.4
GTEX-14E1K-0326-SM-5S2PE 14.2
GTEX-ZVT3-1626-SM-5GU66 13.8
GTEX-QDVN-0826-SM-48TZ2 13.5
GTEX-13FTW-1126-SM-5J2NV 13.4
GTEX-XBEC-1526-SM-4AT68 13.4
GTEX-YEC4-0826-SM-5P9FV 13.4
GTEX-14A5I-1726-SM-5QGQ5 13.3
GTEX-12WSD-1426-SM-5GCN9 13.2
GTEX-13VXU-0926-SM-5IFFH 13.1
GTEX-S33H-1626-SM-4AD68 13.1
GTEX-Y5LM-0426-SM-4VBRO 13.1
GTEX-QEL4-1226-SM-447A4 12.9
GTEX-12WSI-0226-SM-5GCNA 12.8
GTEX-145LU-1326-SM-5LU9N 12.8
GTEX-RM2N-1926-SM-48FCU 12.8
GTEX-131XH-0626-SM-5LZWH 12.7
GTEX-11ZUS-2526-SM-59872 12.6
GTEX-14DAQ-1726-SM-5S2R2 12.6
GTEX-11DXY-0526-SM-5EGGQ 12.5
GTEX-1212Z-0226-SM-59HLF 12.5
GTEX-13FTZ-0726-SM-5IFFY 12.5
GTEX-UPIC-0926-SM-4IHLV 12.4
GTEX-Y5V5-0926-SM-4VBPZ 12.4
GTEX-11NUK-1226-SM-5P9GM 12.3
GTEX-QESD-2026-SM-447BI 12.3
GTEX-13PVR-0126-SM-5S2PY 12.2
GTEX-REY6-1226-SM-48FDR 12.1
GTEX-WYVS-1926-SM-4PQZ2 12.1
GTEX-ZYT6-0626-SM-5E45V 12.0
GTEX-11DXZ-0126-SM-5EGGY 11.9
GTEX-14753-1626-SM-5NQ9L 11.7
GTEX-147JS-1126-SM-5RQIW 11.6
GTEX-TKQ2-1726-SM-4DXUP 11.5
GTEX-132NY-0926-SM-5P9G3 11.4
GTEX-Q734-0326-SM-48U15 11.4
GTEX-RWSA-1426-SM-47JXA 11.4
GTEX-14AS3-0126-SM-5Q5F4 11.2
GTEX-X4EP-1026-SM-4QAS5 11.2
GTEX-X261-1726-SM-4PQYT 11.1
GTEX-13NZB-0626-SM-5IFH6 11.0
GTEX-UPK5-1426-SM-4JBHH 10.9
GTEX-PX3G-0826-SM-48TZS 10.8
GTEX-WQUQ-1926-SM-4OOSA 10.6
GTEX-U3ZN-0226-SM-3DB8D 10.4
GTEX-ZVP2-0626-SM-51MSO 10.4
GTEX-ZF29-2026-SM-4WWB7 10.3
GTEX-13QJC-0726-SM-5RQJK 10.1
GTEX-QV44-0326-SM-4R1KD 10.0
GTEX-WZTO-0626-SM-4PQYY 9.8
GTEX-WFON-1726-SM-4LVMQ 9.7
GTEX-Z9EW-0426-SM-5CVM9 9.7
GTEX-ZZPU-0426-SM-5GZYH 9.7
GTEX-11ZTS-1426-SM-5EQMM 9.4
GTEX-OOBJ-0826-SM-3NB2K 9.3
GTEX-ZAB5-0426-SM-5CVMI 9.2
GTEX-ZF2S-3026-SM-4WWCH 9.2
GTEX-11EQ9-0526-SM-5A5JZ 9.0
GTEX-R53T-0326-SM-48FEC 9.0
GTEX-X3Y1-2726-SM-4PQZH 8.4
GTEX-1399R-1226-SM-5P9GF 7.4
GTEX-VUSG-0126-SM-4KL1X 7.1
GTEX-S4Z8-0526-SM-4AD4T 6.9
GTEX-12ZZZ-1326-SM-59HKW 5.9
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

158.9

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 158.9
FF:10018-101C9 64,69,70 years, mixed 158.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.