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RABAC1
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:83.1RPKM
FANTOM5:71.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA029171

 

Antibody CAB019320

 

Glial cells

Low   Low  

Neuronal cells

Low   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

83.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 83.1
Samples: 117

Max RPKM: 152.6
Min RPKM: 39.7
Std RPKM: 20.9
Median RPKM: 84.6
GTEX-12WSA-0011-R5b-SM-5GU5I 152.6
GTEX-ZUA1-0011-R5b-SM-51MTG 133.2
GTEX-X585-0011-R5A-SM-46MVI 130.9
GTEX-12WSC-0011-R5b-SM-5CVNS 115.8
GTEX-139T8-0011-R5b-SM-5J1MO 115.3
GTEX-13NYB-0011-R5a-SM-5MR45 114.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 114.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 113.9
GTEX-139TT-0011-R5b-SM-5K7W8 113.5
GTEX-132Q8-0011-R5a-SM-5IJDM 112.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 112.9
GTEX-13X6K-0011-R5b-SM-5PNUE 111.3
GTEX-11H98-0011-R5b-SM-57WCF 111.2
GTEX-X4XX-0011-R5A-SM-46MWN 105.1
GTEX-12WSB-0011-R5b-SM-5GU67 103.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 102.9
GTEX-1399T-0011-R5b-SM-5IJDK 101.8
GTEX-13OVH-0011-R5b-SM-5KM4L 101.6
GTEX-OHPN-0011-R5A-SM-2I5FF 101.2
GTEX-14BIM-0011-R5b-SM-5S2RM 100.8
GTEX-13FLW-0011-R5a-SM-5LZX6 100.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 100.1
GTEX-13JUV-0011-R5a-SM-5LZY5 99.6
GTEX-WL46-0011-R5A-SM-3LK6V 99.6
GTEX-13G51-0011-R5a-SM-5L3EB 98.4
GTEX-13NYS-0011-R5a-SM-5MR4D 97.8
GTEX-13X6I-0011-R5a-SM-5PNWW 97.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 96.6
GTEX-RVPV-0011-R5A-SM-2TF69 95.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 95.1
GTEX-145MH-0011-R5a-SM-5P9JT 94.8
GTEX-13FLV-0011-R5a-SM-5LZWT 94.7
GTEX-13FXS-0011-R5b-SM-5LZYE 94.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 94.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 94.5
GTEX-131YS-0011-R5b-SM-5K7YB 94.1
GTEX-T6MN-0011-R5A-SM-32QPD 93.7
GTEX-TSE9-0011-R5A-SM-3DB7J 93.7
GTEX-13VXU-0011-R5a-SM-5O9D7 93.5
GTEX-13CIG-0011-R5b-SM-5L3F2 92.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 92.4
GTEX-11NV4-0011-R5a-SM-5NQ88 92.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 91.7
GTEX-11GSP-0011-R5a-SM-57WBE 91.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 91.0
GTEX-XOTO-0011-R5A-SM-4B657 89.6
GTEX-N7MS-0011-R5a-SM-2HMK8 89.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 89.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 88.4
GTEX-RU72-0011-R5A-SM-2TF6U 87.9
GTEX-WWYW-0011-R5A-SM-3NB3E 87.6
GTEX-145LS-0011-R5a-SM-5SI65 87.1
GTEX-13JVG-0011-R5a-SM-5MR4O 86.7
GTEX-13O3O-0011-R5b-SM-5KM44 86.5
GTEX-13SLX-0011-R5a-SM-5O9BV 85.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 85.9
GTEX-1313W-0011-R5b-SM-5L3EP 85.8
GTEX-13CZV-0011-R5a-SM-5K7XA 85.2
GTEX-13OW5-0011-R5b-SM-5L3FR 84.6
GTEX-11OF3-0011-R5a-SM-57WB4 83.7
GTEX-N7MT-0011-R5a-SM-2I3G6 83.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 83.5
GTEX-T5JC-0011-R5A-SM-32PLK 83.0
GTEX-XMD1-0011-R5A-SM-4AT47 82.5
GTEX-13X6J-0011-R5b-SM-5PNWT 82.3
GTEX-WZTO-0011-R5B-SM-3NMC5 82.3
GTEX-14ABY-0011-R5b-SM-5SI7B 82.0
GTEX-R55E-0011-R5A-SM-2TC5N 81.2
GTEX-13OW6-0011-R5a-SM-5O9BK 81.0
GTEX-13OVL-0011-R5b-SM-5L3FU 80.9
GTEX-144GO-0011-R5a-SM-5PNUR 80.5
GTEX-WVLH-0011-R5A-SM-3MJFW 79.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 79.3
GTEX-13S7M-0011-R5b-SM-5P9HS 78.2
GTEX-NL4W-0011-R5a-SM-2I3GD 78.1
GTEX-ZE7O-0011-R5a-SM-57WBO 77.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 77.5
GTEX-NL3H-0011-R5a-SM-2I3GB 76.6
GTEX-Z93S-0011-R5b-SM-4RGNI 76.1
GTEX-13OW7-0011-R5b-SM-5O9DM 75.2
GTEX-12WSF-0011-R5a-SM-5HL8K 75.1
GTEX-12ZZX-0011-R5a-SM-5HL89 74.4
GTEX-QVJO-0011-R5A-SM-2S1QM 71.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 69.7
GTEX-NPJ7-0011-R5a-SM-33HBK 69.5
GTEX-ZV68-0011-R5a-SM-4YCDW 69.0
GTEX-12WSD-0011-R5b-SM-5CVNG 68.9
GTEX-ZXG5-0011-R5b-SM-57WBN 68.7
GTEX-X261-0011-R5A-SM-3NMB4 68.6
GTEX-S7SE-0011-R5A-SM-2XCDA 67.1
GTEX-YFC4-0011-R5a-SM-4RGLR 65.2
GTEX-YJ89-0011-R5a-SM-4V6GM 65.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 64.5
GTEX-14BIN-0011-R5b-SM-5SI78 63.8
GTEX-ZVT3-0011-R5a-SM-51MSI 62.3
GTEX-12WSH-0011-R5b-SM-5P9F3 62.0
GTEX-1445S-0011-R5a-SM-5PNUS 61.3
GTEX-13112-0011-R5b-SM-5DUV8 60.2
GTEX-RVPU-0011-R5A-SM-2XCAD 58.7
GTEX-UTHO-0011-R5A-SM-3GIJD 58.3
GTEX-139TS-0011-R5b-SM-5J2MZ 57.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 57.4
GTEX-11WQC-0011-R5a-SM-5BC74 56.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 55.3
GTEX-QMR6-0011-R5A-SM-32PKT 53.5
GTEX-P44H-0011-R5A-SM-2XCEX 53.3
GTEX-13CF2-0011-R5a-SM-5LZWS 52.9
GTEX-13FHP-0011-R5b-SM-5LZY2 52.0
GTEX-OXRN-0011-R5A-SM-2I5EF 51.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50.5
GTEX-11UD1-0011-R5b-SM-5P9FP 50.4
GTEX-1477Z-0011-R5b-SM-5PNUO 48.0
GTEX-PVOW-0011-R5A-SM-32PL7 45.1
GTEX-S7PM-0011-R5A-SM-3NM8G 43.7
GTEX-T2IS-0011-R5A-SM-32QP4 41.4
GTEX-145MG-0011-R5b-SM-5S2VU 40.1
GTEX-13NZA-0011-R5b-SM-5KM4K 39.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

71.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 71.5
FF:10164-103B2 76 years, female 75.7
FF:10379-105H1 89 years, female 67.2

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