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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:63.8TPM
GTEx:37.9RPKM
FANTOM5:79.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA041605

  

Antibody HPA043576

  

Antibody CAB034345

  

Adipocytes

 Not detected   Not detected   Not detected  

Chondrocytes

 Low   Medium  

Fibroblasts

 Medium   Medium   Not detected  

Peripheral nerve

 Not detected   Not detected  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not available
Chondrocytes:Low
Fibroblasts:Not detected
 
 

Antibody staining

Antibody HPA041605

  

Antibody HPA043576

  

Antibody CAB034345

  

Adipocytes

 Low   Not detected  

Chondrocytes

 Low   Low   Not detected  

Fibroblasts

 High   Not detected   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

63.8
N/A Female, age 80
Sample 1
TPM: 82.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 49.5
N/A Female, age 57
Sample 3
TPM: 45.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 85.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 55.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

37.9

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 37.7
Samples: 350

Max RPKM: 71.8
Min RPKM: 18.5
Std RPKM: 7.7
Median RPKM: 37.5
GTEX-Y5V6-2526-SM-5IFJV 71.8
GTEX-XYKS-2726-SM-4E3IC 62.8
GTEX-POMQ-2326-SM-5S2VS 61.9
GTEX-NPJ8-0226-SM-48TBN 60.5
GTEX-13G51-2626-SM-5LZYW 59.3
GTEX-ZYFD-0226-SM-5NQ86 57.9
GTEX-11GSO-2326-SM-5A5LX 55.9
GTEX-11EMC-2826-SM-5PNY6 54.7
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 38.2
Samples: 227

Max RPKM: 106.3
Min RPKM: 16
Std RPKM: 9.3
Median RPKM: 37.5
GTEX-13X6H-1726-SM-5Q5EH 106.3
GTEX-1399S-1426-SM-5PNYQ 71.4
GTEX-1212Z-0526-SM-5FQSQ 67.8
GTEX-Y5LM-0826-SM-4VDSW 65.3
GTEX-1128S-0926-SM-5GZZU 64.6
GTEX-1122O-0926-SM-5N9C9 60.9
GTEX-U8XE-1926-SM-3DB98 57.8
GTEX-YJ89-1926-SM-5IFJ6 57.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

79.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 79.8
FF:10010-101C1 65,65,76 years, mixed 79.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.