Tissue expression of COPE - Staining in skin

SKIN - Expression summary

Protein expression

RNA expression

HPA:	67.5	TPM
GTEx:	45.4	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Medium
Keratinocytes:	Low
Langerhans:	Low
Melanocytes:	Low

Antibody staining	Antibody HPA041605	Antibody HPA043576	Antibody CAB034345
Fibroblasts	Medium	Medium	Not detected
Keratinocytes	Not detected	Low	Medium
Langerhans	Medium	Low	Low
Melanocytes	Medium	Low	Low

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Medium

Antibody staining	Antibody HPA041605	Antibody HPA043576	Antibody CAB034345
Epidermal cells	Low	Medium	Medium

SKIN - HPA RNA-seq

Average TPM	67.5

Female, age 34

Sample 1
TPM: 57.3

Cell types%

Keratinocytes: 60
Other cell types: 40

Female, age 30

Sample 2
TPM: 28.7

Cell types%

Keratinocytes: 55
Other cell types: 45

Male, age 57

Sample 3
TPM: 116.5

SKIN - GTEx RNA-seq

Average RPKM	45.4

GTEx sample id

RPKM

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 44.5

Samples: 250

Max RPKM: 77.8
Min RPKM: 25.1
Std RPKM: 8.3
Median RPKM: 43.5

GTEX-X585-2426-SM-46MW2

77.8

GTEX-Y5V6-2326-SM-4VDSA

74.3

GTEX-145MG-1526-SM-5Q5EM

69.9

GTEX-WI4N-2726-SM-3LK7Y

64.2

GTEX-131XH-0126-SM-5LZUY

63.9

GTEX-Y114-2126-SM-4TT8B

63.9

GTEX-ZYW4-0626-SM-59HJR

63.7

GTEX-WFG7-2026-SM-5SI7P

63.0

Show all

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 46.1

Samples: 357

Max RPKM: 83.3
Min RPKM: 20.4
Std RPKM: 9
Median RPKM: 45.4

GTEX-13PVQ-0126-SM-5SIB4

83.3

GTEX-Y3IK-2426-SM-4WWDU

81.1

GTEX-Y5V6-2426-SM-4VDSB

80.8

GTEX-1399U-2326-SM-5K7WY

73.1

GTEX-O5YW-0126-SM-3LK6D

71.1

GTEX-ZVZO-0126-SM-5A5L9

69.4

GTEX-11UD1-0126-SM-5PNYG

69.2

GTEX-O5YT-0126-SM-48TBW

68.3

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue