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Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

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Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

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Score

Score

Antibodies

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CDK6
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

CDK6

Gene description

Cyclin-dependent kinase 6

Protein class

Cancer-related genes
Disease related genes
Enzymes
FDA approved drug targets
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

2
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Mixed
GTEx:Mixed
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression in several tissues, which in cases was combined with nuclear expression. Highest expression in bone marrow poietic cells.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Supported based on 2 antibodies.
HPA002637 , CAB004363
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
N/A
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Bone marrow

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Mixed
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Mixed
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

CDK6 (HGNC Symbol)

Synonyms

PLSTIRE

Description

Cyclin-dependent kinase 6 (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene is a member of the cyclin-dependent protein kinase (CDK) family. CDK family members are highly similar to the gene products of Saccharomyces cerevisiae cdc28, and Schizosaccharomyces pombe cdc2, and are known to be important regulators of cell cycle progression. This kinase is a catalytic subunit of the protein kinase complex that is important for cell cycle G1 phase progression and G1/S transition. The activity of this kinase first appears in mid-G1 phase, which is controlled by the regulatory subunits including D-type cyclins and members of INK4 family of CDK inhibitors. This kinase, as well as CDK4, has been shown to phosphorylate, and thus regulate the activity of, tumor suppressor protein Rb. Expression of this gene is up-regulated in some types of cancer. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Nov 2009]

Chromosome

7

Cytoband

q21.2

Chromosome location (bp)

92604921 - 92836594

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000105810 (version 83.38)

Entrez gene

1021

UniProt

Q00534 (UniProt - Evidence at protein level)

neXtProt

NX_Q00534

Antibodypedia

CDK6 antibodies

PROTEIN BROWSER

CDK6-001
CDK6-002

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CDK6-001
ENSP00000265734
ENST00000265734
Q00534 [Direct mapping]
Cyclin-dependent kinase 6
Show all
Enzymes
   ENZYME proteins
   Transferases
   Kinases
   CMGC Ser/Thr protein kinases
   MEMSAT-SVM predicted membrane proteins
Predicted intracellular proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
FDA approved drug targets
   Small molecule drugs
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000082 [G1/S transition of mitotic cell cycle]
GO:0000278 [mitotic cell cycle]
GO:0000307 [cyclin-dependent protein kinase holoenzyme complex]
GO:0001726 [ruffle]
GO:0001954 [positive regulation of cell-matrix adhesion]
GO:0002244 [hematopoietic progenitor cell differentiation]
GO:0003323 [type B pancreatic cell development]
GO:0004672 [protein kinase activity]
GO:0004693 [cyclin-dependent protein serine/threonine kinase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005829 [cytosol]
GO:0006468 [protein phosphorylation]
GO:0007050 [cell cycle arrest]
GO:0007219 [Notch signaling pathway]
GO:0008285 [negative regulation of cell proliferation]
GO:0009615 [response to virus]
GO:0010468 [regulation of gene expression]
GO:0010628 [positive regulation of gene expression]
GO:0014002 [astrocyte development]
GO:0016301 [kinase activity]
GO:0021542 [dentate gyrus development]
GO:0021670 [lateral ventricle development]
GO:0030097 [hemopoiesis]
GO:0030332 [cyclin binding]
GO:0033077 [T cell differentiation in thymus]
GO:0042063 [gliogenesis]
GO:0043697 [cell dedifferentiation]
GO:0045596 [negative regulation of cell differentiation]
GO:0045638 [negative regulation of myeloid cell differentiation]
GO:0045646 [regulation of erythrocyte differentiation]
GO:0045668 [negative regulation of osteoblast differentiation]
GO:0045786 [negative regulation of cell cycle]
GO:0048146 [positive regulation of fibroblast proliferation]
GO:0048699 [generation of neurons]
GO:0050680 [negative regulation of epithelial cell proliferation]
GO:0051301 [cell division]
GO:0060218 [hematopoietic stem cell differentiation]
GO:2000145 [regulation of cell motility]
GO:2000773 [negative regulation of cellular senescence]
Show all
326 aa
36.9 kDa
No 0
CDK6-002
ENSP00000397087
ENST00000424848
Q00534 [Direct mapping]
Cyclin-dependent kinase 6
Show all
Enzymes
   ENZYME proteins
   Transferases
   Kinases
   CMGC Ser/Thr protein kinases
   MEMSAT-SVM predicted membrane proteins
Predicted intracellular proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
FDA approved drug targets
   Small molecule drugs
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000082 [G1/S transition of mitotic cell cycle]
GO:0000278 [mitotic cell cycle]
GO:0000307 [cyclin-dependent protein kinase holoenzyme complex]
GO:0001726 [ruffle]
GO:0001954 [positive regulation of cell-matrix adhesion]
GO:0003323 [type B pancreatic cell development]
GO:0004672 [protein kinase activity]
GO:0004693 [cyclin-dependent protein serine/threonine kinase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005829 [cytosol]
GO:0006468 [protein phosphorylation]
GO:0007050 [cell cycle arrest]
GO:0008285 [negative regulation of cell proliferation]
GO:0009615 [response to virus]
GO:0010468 [regulation of gene expression]
GO:0014002 [astrocyte development]
GO:0021542 [dentate gyrus development]
GO:0021670 [lateral ventricle development]
GO:0030332 [cyclin binding]
GO:0042063 [gliogenesis]
GO:0043697 [cell dedifferentiation]
GO:0045596 [negative regulation of cell differentiation]
GO:0045638 [negative regulation of myeloid cell differentiation]
GO:0045646 [regulation of erythrocyte differentiation]
GO:0045668 [negative regulation of osteoblast differentiation]
GO:0045786 [negative regulation of cell cycle]
GO:0048146 [positive regulation of fibroblast proliferation]
GO:0048699 [generation of neurons]
GO:0050680 [negative regulation of epithelial cell proliferation]
GO:0051301 [cell division]
GO:2000145 [regulation of cell motility]
GO:2000773 [negative regulation of cellular senescence]
Show all
326 aa
36.9 kDa
No 0

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