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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:69.7TPM
GTEx:42.0RPKM
FANTOM5:96.2Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Low
Hepatocytes:High
 

Antibody staining

Antibody HPA019522

 

Antibody HPA021002

 

Bile duct cells

Low   Medium  

Hepatocytes

High   High  
   
   
   

LIVER - HPA RNA-seq

Average TPM

69.7

N/A Female, age 60
Sample 1
TPM: 57.8
overview Male, age 54
Sample 2
TPM: 64.7
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 66.3
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 78.2
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 52.6
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 70.0
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 59.8
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 66.1
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 71.4
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 109.7
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

42.0

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 42.0
Samples: 119

Max RPKM: 86.7
Min RPKM: 11.8
Std RPKM: 14.6
Median RPKM: 41
GTEX-R53T-0326-SM-48FEC 86.7
GTEX-ZYT6-0626-SM-5E45V 76.7
GTEX-14AS3-0126-SM-5Q5F4 71.9
GTEX-12KS4-1326-SM-5LUB3 68.8
GTEX-OOBJ-0826-SM-3NB2K 67.5
GTEX-1399R-1226-SM-5P9GF 66.5
GTEX-UTHO-2426-SM-4JBHD 66.2
GTEX-ZAB5-0426-SM-5CVMI 66.2
GTEX-QESD-2026-SM-447BI 65.8
GTEX-11OF3-0726-SM-5BC4Z 65.4
GTEX-QV44-0326-SM-4R1KD 64.8
GTEX-ZF2S-3026-SM-4WWCH 64.7
GTEX-ZPU1-0826-SM-57WG2 63.3
GTEX-145MF-0826-SM-5QGQA 63.2
GTEX-13OW6-2626-SM-5IFF2 60.2
GTEX-PX3G-0826-SM-48TZS 59.4
GTEX-Q734-0326-SM-48U15 57.8
GTEX-RTLS-1326-SM-46MUN 57.3
GTEX-139TS-1426-SM-5IFJD 57.2
GTEX-14DAQ-1726-SM-5S2R2 56.7
GTEX-QEG4-1826-SM-4R1JN 55.7
GTEX-ZVT3-1626-SM-5GU66 55.1
GTEX-Y5LM-0426-SM-4VBRO 54.8
GTEX-13SLX-1226-SM-5S2Q6 54.5
GTEX-UPK5-1426-SM-4JBHH 53.9
GTEX-11WQC-0726-SM-5EQMR 53.2
GTEX-13N11-0926-SM-5IJG2 53.2
GTEX-Y5V5-0926-SM-4VBPZ 53.2
GTEX-WYVS-1926-SM-4PQZ2 52.1
GTEX-13FTZ-0726-SM-5IFFY 51.5
GTEX-1399T-0826-SM-5IFES 50.4
GTEX-RU72-1426-SM-46MUF 50.0
GTEX-X4EO-1126-SM-4QARQ 49.8
GTEX-13VXU-0926-SM-5IFFH 49.5
GTEX-14E1K-0326-SM-5S2PE 49.4
GTEX-14753-1626-SM-5NQ9L 49.0
GTEX-YECK-1926-SM-4W21H 49.0
GTEX-P78B-1326-SM-3P611 48.9
GTEX-131XH-0626-SM-5LZWH 48.7
GTEX-131YS-1626-SM-5HL6C 48.4
GTEX-11DXZ-0126-SM-5EGGY 48.3
GTEX-SJXC-1226-SM-4DM78 47.2
GTEX-1269C-0626-SM-5FQSS 47.1
GTEX-147JS-1126-SM-5RQIW 46.8
GTEX-T6MN-1226-SM-3NMA5 46.4
GTEX-13112-1426-SM-5EGH8 46.2
GTEX-U3ZN-0226-SM-3DB8D 46.0
GTEX-12WSI-0226-SM-5GCNA 44.9
GTEX-11DXY-0526-SM-5EGGQ 44.8
GTEX-13NYB-1026-SM-5IFH3 44.5
GTEX-YB5E-0326-SM-5IFHU 44.5
GTEX-145MO-2326-SM-5NQ9K 43.5
GTEX-11ZTS-1426-SM-5EQMM 42.3
GTEX-139YR-0226-SM-5IFEM 41.7
GTEX-RNOR-1426-SM-48FDJ 41.6
GTEX-UPIC-0926-SM-4IHLV 41.6
GTEX-11NUK-1226-SM-5P9GM 41.4
GTEX-11NV4-1326-SM-5HL6V 41.4
GTEX-14A5I-1726-SM-5QGQ5 41.1
GTEX-RM2N-1926-SM-48FCU 41.0
GTEX-11ZVC-0726-SM-5FQT9 40.9
GTEX-139TU-0826-SM-5IJFG 40.3
GTEX-13FLV-0326-SM-5N9DJ 40.3
GTEX-WFON-1726-SM-4LVMQ 39.5
GTEX-S33H-1626-SM-4AD68 39.4
GTEX-12WSD-1426-SM-5GCN9 39.3
GTEX-12WSM-0726-SM-5GCOW 39.3
GTEX-TKQ2-1726-SM-4DXUP 38.6
GTEX-145LU-1326-SM-5LU9N 38.2
GTEX-11EQ9-0526-SM-5A5JZ 38.0
GTEX-Z9EW-0426-SM-5CVM9 37.6
GTEX-147F4-1426-SM-5LUA8 37.4
GTEX-13FTW-1126-SM-5J2NV 37.2
GTEX-13NZ9-1326-SM-5MR3V 37.0
GTEX-ZAB4-0826-SM-5LU9D 36.9
GTEX-REY6-1226-SM-48FDR 36.6
GTEX-ZVP2-0626-SM-51MSO 36.1
GTEX-ZZPU-0426-SM-5GZYH 35.5
GTEX-1212Z-0226-SM-59HLF 35.3
GTEX-YFC4-1526-SM-5IFJS 34.3
GTEX-RWSA-1426-SM-47JXA 34.1
GTEX-WZTO-0626-SM-4PQYY 34.0
GTEX-XOTO-0826-SM-4B65O 34.0
GTEX-S4Z8-0526-SM-4AD4T 33.9
GTEX-VUSG-0126-SM-4KL1X 33.5
GTEX-13NZB-0626-SM-5IFH6 32.6
GTEX-13QJC-0726-SM-5RQJK 31.2
GTEX-X3Y1-2726-SM-4PQZH 31.1
GTEX-X4EP-1026-SM-4QAS5 30.9
GTEX-11ZUS-2526-SM-59872 30.6
GTEX-RN64-1826-SM-48FDV 30.5
GTEX-1497J-0726-SM-5Q5D1 30.4
GTEX-12WSG-0626-SM-5FQTQ 30.3
GTEX-ZF29-2026-SM-4WWB7 30.1
GTEX-WQUQ-1926-SM-4OOSA 29.9
GTEX-132NY-0926-SM-5P9G3 28.9
GTEX-13N2G-0926-SM-5IFGJ 28.9
GTEX-13113-1326-SM-5GCOI 28.6
GTEX-X261-1726-SM-4PQYT 27.6
GTEX-Q2AG-1126-SM-48U1P 27.5
GTEX-ZYY3-0626-SM-5NQ6W 27.5
GTEX-XBEC-1526-SM-4AT68 27.1
GTEX-S32W-1926-SM-4AD63 26.0
GTEX-ZVT4-0626-SM-5E45T 25.5
GTEX-146FH-1526-SM-5NQBU 24.6
GTEX-13O3O-1826-SM-5IFGW 23.9
GTEX-13PVR-0126-SM-5S2PY 23.7
GTEX-12696-0826-SM-5EGGE 23.2
GTEX-12WSL-0226-SM-5CVMJ 23.1
GTEX-QEL4-1226-SM-447A4 22.6
GTEX-ZTPG-1426-SM-51MT3 22.3
GTEX-YEC4-0826-SM-5P9FV 21.7
GTEX-131XE-0326-SM-5LZVO 19.3
GTEX-11GSP-0626-SM-5986T 17.6
GTEX-14C38-1526-SM-5RQJ7 16.8
GTEX-144GM-1326-SM-5LU5E 16.6
GTEX-12ZZZ-1326-SM-59HKW 14.4
GTEX-QDVN-0826-SM-48TZ2 13.5
GTEX-X4XY-1626-SM-46MVN 11.8
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

96.2

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 96.2
FF:10018-101C9 64,69,70 years, mixed 96.2

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