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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:27.7RPKM
FANTOM5:74.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA000162

 

Glial cells

Medium  

Neuronal cells

Not detected  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

27.7

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 27.7
Samples: 117

Max RPKM: 63.9
Min RPKM: 8.6
Std RPKM: 9.4
Median RPKM: 26.9
GTEX-T2IS-0011-R5A-SM-32QP4 63.9
GTEX-PVOW-0011-R5A-SM-32PL7 58.1
GTEX-P44H-0011-R5A-SM-2XCEX 51.7
GTEX-S7SE-0011-R5A-SM-2XCDA 45.9
GTEX-131YS-0011-R5b-SM-5K7YB 43.5
GTEX-13G51-0011-R5a-SM-5L3EB 40.7
GTEX-WVLH-0011-R5A-SM-3MJFW 40.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 39.0
GTEX-WWYW-0011-R5A-SM-3NB3E 39.0
GTEX-T6MN-0011-R5A-SM-32QPD 38.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 38.2
GTEX-WZTO-0011-R5B-SM-3NMC5 38.0
GTEX-11OF3-0011-R5a-SM-57WB4 37.5
GTEX-145LS-0011-R5a-SM-5SI65 37.2
GTEX-QVJO-0011-R5A-SM-2S1QM 37.2
GTEX-WHSE-0011-R5A-SM-3P5ZO 37.0
GTEX-UTHO-0011-R5A-SM-3GIJD 36.5
GTEX-1399T-0011-R5b-SM-5IJDK 36.2
GTEX-WL46-0011-R5A-SM-3LK6V 36.1
GTEX-139TT-0011-R5b-SM-5K7W8 36.0
GTEX-N7MS-0011-R5a-SM-2HMK8 35.7
GTEX-Z93S-0011-R5b-SM-4RGNI 35.7
GTEX-XMD1-0011-R5A-SM-4AT47 35.5
GTEX-145MH-0011-R5a-SM-5P9JT 35.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 35.3
GTEX-12WSC-0011-R5b-SM-5CVNS 35.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 34.6
GTEX-13X6J-0011-R5b-SM-5PNWT 34.6
GTEX-13OW6-0011-R5a-SM-5O9BK 34.5
GTEX-14ABY-0011-R5b-SM-5SI7B 34.3
GTEX-11GSP-0011-R5a-SM-57WBE 33.8
GTEX-14BIM-0011-R5b-SM-5S2RM 33.8
GTEX-1313W-0011-R5b-SM-5L3EP 33.7
GTEX-R55E-0011-R5A-SM-2TC5N 33.6
GTEX-T5JC-0011-R5A-SM-32PLK 33.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 33.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 32.8
GTEX-QMR6-0011-R5A-SM-32PKT 31.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 31.7
GTEX-13FXS-0011-R5b-SM-5LZYE 31.6
GTEX-N7MT-0011-R5a-SM-2I3G6 31.0
GTEX-13VXU-0011-R5a-SM-5O9D7 30.9
GTEX-13X6I-0011-R5a-SM-5PNWW 30.7
GTEX-11H98-0011-R5b-SM-57WCF 30.3
GTEX-13SLX-0011-R5a-SM-5O9BV 30.3
GTEX-RU72-0011-R5A-SM-2TF6U 30.2
GTEX-RVPU-0011-R5A-SM-2XCAD 29.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 29.6
GTEX-13OVL-0011-R5b-SM-5L3FU 29.5
GTEX-X585-0011-R5A-SM-46MVI 29.4
GTEX-13O3O-0011-R5b-SM-5KM44 29.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 29.1
GTEX-13FLW-0011-R5a-SM-5LZX6 29.1
GTEX-11NV4-0011-R5a-SM-5NQ88 28.0
GTEX-12WSB-0011-R5b-SM-5GU67 27.9
GTEX-ZUA1-0011-R5b-SM-51MTG 27.7
GTEX-12WSF-0011-R5a-SM-5HL8K 27.3
GTEX-12WSD-0011-R5b-SM-5CVNG 26.9
GTEX-139TS-0011-R5b-SM-5J2MZ 26.9
GTEX-ZE7O-0011-R5a-SM-57WBO 26.9
GTEX-X4XX-0011-R5A-SM-46MWN 26.6
GTEX-132Q8-0011-R5a-SM-5IJDM 26.3
GTEX-YFC4-0011-R5a-SM-4RGLR 26.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 25.9
GTEX-13CZV-0011-R5a-SM-5K7XA 25.7
GTEX-13OW7-0011-R5b-SM-5O9DM 25.7
GTEX-RVPV-0011-R5A-SM-2TF69 25.2
GTEX-NL3H-0011-R5a-SM-2I3GB 24.9
GTEX-13S7M-0011-R5b-SM-5P9HS 24.7
GTEX-NL4W-0011-R5a-SM-2I3GD 24.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 24.5
GTEX-13JUV-0011-R5a-SM-5LZY5 24.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 24.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 24.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 24.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 24.0
GTEX-144GO-0011-R5a-SM-5PNUR 23.8
GTEX-14BIN-0011-R5b-SM-5SI78 23.3
GTEX-TSE9-0011-R5A-SM-3DB7J 23.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 23.0
GTEX-13X6K-0011-R5b-SM-5PNUE 22.9
GTEX-11WQC-0011-R5a-SM-5BC74 22.6
GTEX-12WSA-0011-R5b-SM-5GU5I 22.6
GTEX-13FLV-0011-R5a-SM-5LZWT 22.6
GTEX-ZXG5-0011-R5b-SM-57WBN 22.3
GTEX-13NYB-0011-R5a-SM-5MR45 21.8
GTEX-13NYS-0011-R5a-SM-5MR4D 21.4
GTEX-OHPN-0011-R5A-SM-2I5FF 21.4
GTEX-12ZZX-0011-R5a-SM-5HL89 21.3
GTEX-13OW5-0011-R5b-SM-5L3FR 21.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 21.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 20.9
GTEX-13JVG-0011-R5a-SM-5MR4O 20.8
GTEX-OXRN-0011-R5A-SM-2I5EF 19.8
GTEX-XOTO-0011-R5A-SM-4B657 19.6
GTEX-13OVH-0011-R5b-SM-5KM4L 19.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 18.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 18.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 17.9
GTEX-NPJ7-0011-R5a-SM-33HBK 17.7
GTEX-X261-0011-R5A-SM-3NMB4 17.0
GTEX-ZVT3-0011-R5a-SM-51MSI 16.9
GTEX-1445S-0011-R5a-SM-5PNUS 16.8
GTEX-YJ89-0011-R5a-SM-4V6GM 16.7
GTEX-13CIG-0011-R5b-SM-5L3F2 16.4
GTEX-ZV68-0011-R5a-SM-4YCDW 16.4
GTEX-S7PM-0011-R5A-SM-3NM8G 16.0
GTEX-13FHP-0011-R5b-SM-5LZY2 15.1
GTEX-12WSH-0011-R5b-SM-5P9F3 14.6
GTEX-144GL-0011-R5b-SM-5PNUJ 14.2
GTEX-13112-0011-R5b-SM-5DUV8 13.9
GTEX-11UD1-0011-R5b-SM-5P9FP 12.3
GTEX-13CF2-0011-R5a-SM-5LZWS 11.7
GTEX-1477Z-0011-R5b-SM-5PNUO 10.7
GTEX-145MG-0011-R5b-SM-5S2VU 9.2
GTEX-139T8-0011-R5b-SM-5J1MO 8.9
GTEX-13NZA-0011-R5b-SM-5KM4K 8.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

74.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 74.9
FF:10379-105H1 89 years, female 81.7
FF:10164-103B2 76 years, female 68.1

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The Human Protein Atlas project is funded
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