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Field

Term
Gene name

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Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

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Searches

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Cell type

Expression

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Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA ENDOMETRIUM

GENE/PROTEIN

Antibody validation


Dictionary

Endometrium

Tissue proteome

Endometrium

ENDOMETRIUM - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:66.6TPM
GTEx:18.2RPKM
FANTOM5:81.3Tags Per Million

ENDOMETRIUM 1 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Not detected
Glandular cells:Medium
 

Antibody staining

Antibody HPA008233

 

Cells in endometrial stroma

Not detected  

Glandular cells

Medium  
 
 
 

ENDOMETRIUM 2 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Not detected
Glandular cells:Low
 

Antibody staining

Antibody HPA008233

 

Cells in endometrial stroma

Not detected  

Glandular cells

Low  
 
 
 

ENDOMETRIUM - HPA RNA-seq

Average TPM

66.6

overview Female, age 34
Sample 1
TPM: 51.1
Cell types%
Glandular cells: 5
Stromal cells: 25
Smooth muscle cells: 65
Other cell types: 5
overview Female, age 56
Sample 2
TPM: 57.7
Cell types%
Glandular cells: 5
Stromal cells: 15
Smooth muscle cells: 75
Other cell types: 5
overview Female, age 40
Sample 3
TPM: 72.5
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 70
Other cell types: 5
overview Female, age 60
Sample 4
TPM: 63.0
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 75
Other cell types: 0
overview Female, age 83
Sample 5
TPM: 88.7
Cell types%
Glandular cells: 5
Stromal cells: 10
Smooth muscle cells: 80
Other cell types: 5

ENDOMETRIUM - GTEx RNA-seq

Average RPKM

18.2

GTEx sample id

RPKM

16.917.919.315.822.10246810121416182022
 
16.917.919.315.822.10246810121416182022

Uterus - Endometrium

Uterus - Endometrium
RPKM: 18.2
Samples: 14

Max RPKM: 22.1
Min RPKM: 15.8
Std RPKM: 1.8
Median RPKM: 17.9
GTEX-ZVT2-0426-SM-5E44S 22.1
GTEX-R55G-1626-SM-48FF4 21.3
GTEX-T6MO-1526-SM-4DM57 19.9
GTEX-U3ZN-0726-SM-4DXT5 19.7
GTEX-PX3G-2026-SM-48U1H 18.2
GTEX-P78B-2526-SM-3P5ZY 18.1
GTEX-T5JW-1526-SM-4DM5E 18.0
GTEX-ZTPG-2026-SM-5O999 17.8
GTEX-PWN1-2026-SM-48TD9 17.6
GTEX-S32W-1426-SM-4AD66 17.1
GTEX-Y114-1826-SM-4TT87 16.9
GTEX-11EM3-1926-SM-5987U 16.4
GTEX-XUZC-0926-SM-4BOQF 16.4
GTEX-13QBU-1626-SM-5LU4S 15.8
Show all

ENDOMETRIUM - FANTOM5 CAGE

Average Tags Per Million

81.3

FANTOM5 sample id

Sample description

Tags Per Million

Uterus
Tags Per Million: 81.3
FF:10100-102D1 23-63 years, female 81.3

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