We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
LHPP
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:48.9RPKM
FANTOM5:152.6Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Low
 

Antibody staining

Antibody HPA009163

 

Antibody HPA009269

 

Glial cells

Medium   Medium  

Neuronal cells

Low   Low  
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

48.9

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 48.9
Samples: 94

Max RPKM: 134.8
Min RPKM: 9.9
Std RPKM: 23.8
Median RPKM: 41.9
GTEX-12WSB-0011-R1b-SM-5P9EY 134.8
GTEX-13OW5-0011-R1b-SM-5L3GE 119.8
GTEX-13OVL-0011-R1a-SM-5L3H5 115.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 99.1
GTEX-12WSH-0011-R1a-SM-5GU5V 97.1
GTEX-13QJC-0011-R1b-SM-5S2UU 89.2
GTEX-13N1W-0011-R1b-SM-5MR4T 87.1
GTEX-145LS-0011-R1b-SM-5PNUP 85.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 82.8
GTEX-13G51-0011-R1a-SM-5LZYR 79.1
GTEX-11UD1-0011-R1b-SM-5BC7D 78.1
GTEX-WZTO-0011-R1B-SM-3NMAR 77.0
GTEX-1313W-0011-R1b-SM-5EQ4A 76.0
GTEX-11ZTS-0011-R1a-SM-5BC71 74.2
GTEX-13NZA-0011-R1b-SM-5LUAF 73.8
GTEX-13S7M-0011-R1b-SM-5PNZE 73.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 72.1
GTEX-13JVG-0011-R1a-SM-5KM32 70.2
GTEX-ZAB4-0011-R1a-SM-4RGNO 69.9
GTEX-145LU-0011-R1a-SM-5Q5CE 68.4
GTEX-XMD1-0011-R1A-SM-4AT4C 67.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 67.1
GTEX-11GSO-0011-R1b-SM-57WD3 66.0
GTEX-QMR6-0011-R1A-SM-32PKW 64.7
GTEX-T6MN-0011-R1A-SM-32QOY 64.7
GTEX-13NYS-0011-R1b-SM-5MR55 64.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 62.9
GTEX-13NYB-0011-R1b-SM-5KM4F 62.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 56.4
GTEX-UTHO-0011-R1A-SM-3GIJO 50.4
GTEX-X4XX-0011-R1B-SM-3P622 49.8
GTEX-13N2G-0011-R1b-SM-5MR3G 49.8
GTEX-1399T-0011-R1b-SM-5DUWN 49.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 48.8
GTEX-12WSD-0011-R1b-SM-5LZVY 48.5
GTEX-QVJO-0011-R1A-SM-2S1QI 47.6
GTEX-13FXS-0011-R1a-SM-5K7U6 47.2
GTEX-144GL-0011-R1a-SM-5PNZ5 47.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 45.8
GTEX-XOTO-0011-R1B-SM-4B65C 45.1
GTEX-PWO3-0011-R1A-SM-2I5EW 45.1
GTEX-13OW7-0011-R1b-SM-5L3HF 44.4
GTEX-12WSM-0011-R1a-SM-5LZW6 44.2
GTEX-13JUV-0011-R1a-SM-5LZY4 44.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 44.1
GTEX-N7MS-0011-R1a-SM-2HMJG 43.1
GTEX-P44H-0011-R1A-SM-3NM8J 42.0
GTEX-ZUA1-0011-R1a-SM-4YCE2 41.9
GTEX-ZVZQ-0011-R1a-SM-57WBU 41.9
GTEX-12WSF-0011-R1a-SM-5DUVI 41.5
GTEX-13OW8-0011-R1a-SM-5L3HI 41.4
GTEX-13112-0011-R1b-SM-5HL7K 41.2
GTEX-N7MT-0011-R1a-SM-5SI7S 40.4
GTEX-WL46-0011-R1A-SM-3LK6M 39.4
GTEX-QVUS-0011-R1A-SM-3GAD2 37.8
GTEX-139TT-0011-R1a-SM-5LZVD 37.8
GTEX-13O3O-0011-R1b-SM-5KM2K 37.7
GTEX-13X6I-0011-R1b-SM-5PNZC 36.9
GTEX-131YS-0011-R1a-SM-5DUXC 36.8
GTEX-14ASI-0011-R1b-SM-5S2TY 35.8
GTEX-PVOW-0011-R1A-SM-32PL6 35.3
GTEX-1212Z-0011-R1b-SM-5BC72 35.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 34.2
GTEX-13FHO-0011-R1b-SM-5KLZG 33.4
GTEX-13CF2-0011-R1a-SM-5LZY1 33.1
GTEX-13FLW-0011-R1b-SM-5LZX2 32.8
GTEX-T5JC-0011-R1A-SM-32PM6 31.7
GTEX-ZF28-0011-R1a-SM-4WWD1 31.5
GTEX-12WSE-0011-R1b-SM-5GU4V 31.4
GTEX-13FHP-0011-R1b-SM-5K7XL 31.3
GTEX-YFC4-0011-R1a-SM-4V6EH 31.3
GTEX-132Q8-0011-R1a-SM-5EGLK 30.7
GTEX-13FTY-0011-R1a-SM-5LZXE 30.4
GTEX-WWYW-0011-R1A-SM-3TW8G 30.4
GTEX-WVLH-0011-R1A-SM-4MVOK 30.3
GTEX-144GO-0011-R1a-SM-5PNWO 29.9
GTEX-ZE7O-0011-R1a-SM-57WDM 29.0
GTEX-X585-0011-R1B-SM-46MVE 28.6
GTEX-TSE9-0011-R1A-SM-3DB7E 27.8
GTEX-145MH-0011-R1b-SM-5PNWY 27.8
GTEX-R55E-0011-R1A-SM-2TC6N 26.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 26.1
GTEX-S7SE-0011-R1A-SM-2XCDE 26.0
GTEX-NL3H-0011-R1a-SM-48TDJ 25.9
GTEX-YJ89-0011-R1a-SM-4RGLS 25.5
GTEX-RNOR-0011-R1A-SM-5SI8F 24.6
GTEX-NPJ8-0011-R1a-SM-33HCB 24.0
GTEX-11ONC-0011-R1a-SM-57WD4 24.0
GTEX-QDT8-0011-R1A-SM-32PKS 23.9
GTEX-NPJ7-0011-R1a-SM-3GACT 23.8
GTEX-13PDP-0011-R1a-SM-5PNX5 22.9
GTEX-13SLW-0011-R1a-SM-5S2W7 22.8
GTEX-131XH-0011-R1a-SM-5DUWA 18.2
GTEX-139T8-0011-R1a-SM-5HL75 9.9
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

152.6

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 152.6
FF:10153-102I9 76 years, female 235.3
FF:10169-103B7 60 years, female 130.5
FF:10374-105G5 89 years, female 92.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.