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SMC3

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:23.0TPM
GTEx:13.8RPKM
FANTOM5:23.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA037411

  

Adipocytes

 Low  

Chondrocytes

 Not detected  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Not detected
Fibroblasts:Medium
 
 
 

Antibody staining

Antibody HPA037411

  

Chondrocytes

 Not detected  

Fibroblasts

 Medium  
    
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

23.0
N/A Female, age 80
Sample 1
TPM: 25.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 21.6
N/A Female, age 57
Sample 3
TPM: 21.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 28.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 18.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

13.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 15.0
Samples: 350

Max RPKM: 30.3
Min RPKM: 7.2
Std RPKM: 2.5
Median RPKM: 14.9
GTEX-POYW-0726-SM-2XCEO 30.3
GTEX-TSE9-0226-SM-3DB84 23.0
GTEX-O5YT-0226-SM-32PK5 22.7
GTEX-QEL4-0326-SM-3GAE5 22.5
GTEX-139D8-0326-SM-5IJCJ 21.3
GTEX-SNMC-1326-SM-2XCFK 20.8
GTEX-U3ZN-2626-SM-3DB7T 20.6
GTEX-12WSA-0326-SM-5BC6I 20.1
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 12.0
Samples: 227

Max RPKM: 20.3
Min RPKM: 5.8
Std RPKM: 2.4
Median RPKM: 12
GTEX-13S86-0926-SM-5SI6I 20.3
GTEX-13W46-1226-SM-5SIAS 18.9
GTEX-11NV4-1426-SM-5BC4W 18.5
GTEX-ZPU1-1226-SM-5HL71 18.5
GTEX-Y8E4-1226-SM-5IFIM 17.8
GTEX-ZAB5-1126-SM-5Q5AD 17.5
GTEX-ZT9X-0926-SM-5O9C4 17.4
GTEX-13NZB-0826-SM-5K7X5 16.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

23.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 23.8
FF:10010-101C1 65,65,76 years, mixed 23.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.