Tissue expression of SMC3 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	22.4	TPM
GTEx:	12.6	RPKM
FANTOM5:	27.3	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Medium

Antibody staining	Antibody HPA037411
Squamous epithelial cells	Medium

ESOPHAGUS - HPA RNA-seq

Average TPM	22.4

Female, age 70

Sample 1
TPM: 17.6

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 26.3

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 23.3

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	12.6

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 12.6

Samples: 286

Max RPKM: 24.9
Min RPKM: 4.4
Std RPKM: 3.1
Median RPKM: 12.5

GTEX-133LE-0626-SM-5IFFJ

24.9

GTEX-TMMY-1126-SM-4DXSX

21.5

GTEX-146FQ-1026-SM-5LU8I

20.8

GTEX-RUSQ-0826-SM-47JWW

20.3

GTEX-12WSL-1526-SM-5GCP8

20.1

GTEX-RU72-0726-SM-46MUW

20.1

GTEX-144GN-0626-SM-5O9B2

19.1

GTEX-ZDYS-0826-SM-4WWCR

18.9

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	27.3

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 27.3

FF:10015-101C6

68,74,75 years, mixed

27.3