We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SMC3
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:34.8TPM
GTEx:14.6RPKM
FANTOM5:26.6Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Not detected
Cells in white pulp:Not detected
 

Antibody staining

Antibody HPA037411

 

Cells in red pulp

Not detected  

Cells in white pulp

Not detected  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

34.8

overview Female, age 60
Sample 1
TPM: 34.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 28.2
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 31.3
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 34.3
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 45.5
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

14.6

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 14.6
Samples: 104

Max RPKM: 19.7
Min RPKM: 9.7
Std RPKM: 2.3
Median RPKM: 14.4
GTEX-ZP4G-0326-SM-4YCEF 19.7
GTEX-139T6-0226-SM-5IFGZ 19.5
GTEX-11P7K-0426-SM-5BC5H 19.3
GTEX-1211K-0426-SM-5FQTP 19.0
GTEX-131XG-0426-SM-5IFGD 19.0
GTEX-ZPU1-1026-SM-4YCEQ 18.5
GTEX-YFCO-0926-SM-5LUA5 18.4
GTEX-Y114-0726-SM-4TT6U 18.1
GTEX-146FR-1926-SM-5NQA6 17.9
GTEX-WHWD-0126-SM-4OORS 17.9
GTEX-11VI4-0126-SM-5GU6Z 17.8
GTEX-13PVR-0326-SM-5RQJY 17.8
GTEX-117YX-2126-SM-5GIEL 17.5
GTEX-11DXX-0726-SM-5H12X 17.5
GTEX-12WSK-0126-SM-5GCO7 17.5
GTEX-13FH7-1326-SM-5IFG8 17.4
GTEX-1122O-0526-SM-5N9DM 17.3
GTEX-11EQ9-0426-SM-5A5JY 17.3
GTEX-R55G-0226-SM-48FEI 17.2
GTEX-ZAB5-0526-SM-5CVMU 17.1
GTEX-1399S-0226-SM-5IFFG 17.0
GTEX-131XE-1126-SM-5EGHW 16.9
GTEX-13VXT-1326-SM-5LU3Y 16.9
GTEX-YB5E-0426-SM-5IFHR 16.9
GTEX-11P81-1326-SM-5GU5S 16.6
GTEX-13S86-0126-SM-5S2PI 16.6
GTEX-132QS-0226-SM-5IFFZ 16.5
GTEX-XV7Q-0126-SM-4BRVK 16.4
GTEX-13CF3-0226-SM-5J1NW 16.3
GTEX-ZYWO-0226-SM-5GZX3 16.2
GTEX-1399R-0226-SM-5IJGG 15.9
GTEX-ZLFU-0526-SM-4WWBN 15.8
GTEX-13PL7-1126-SM-5MR5O 15.7
GTEX-YB5K-1926-SM-4VDT4 15.7
GTEX-11XUK-0426-SM-5EQML 15.6
GTEX-Y5LM-0326-SM-4VBRN 15.6
GTEX-ZVZP-0726-SM-59HKA 15.5
GTEX-QMRM-0226-SM-4R1K7 15.4
GTEX-XAJ8-0126-SM-47JYG 15.4
GTEX-12BJ1-0726-SM-5EGGF 15.3
GTEX-P4PP-0926-SM-48TBZ 15.3
GTEX-XMK1-0126-SM-4B65F 15.3
GTEX-ZDTT-1026-SM-5KM19 15.1
GTEX-XGQ4-0126-SM-4AT4H 15.0
GTEX-13111-0126-SM-5EGHO 14.8
GTEX-144GN-2126-SM-5O99D 14.8
GTEX-PW2O-0126-SM-48TC8 14.8
GTEX-14DAR-0326-SM-5S2PS 14.7
GTEX-VJYA-0126-SM-4KL1P 14.6
GTEX-13N11-0126-SM-5KM2Z 14.5
GTEX-XPVG-0626-SM-4B65B 14.5
GTEX-PLZ6-0126-SM-48TC6 14.4
GTEX-PX3G-0926-SM-48U12 14.4
GTEX-145MN-0126-SM-5RQHY 14.2
GTEX-ZLWG-0426-SM-4WWFA 14.1
GTEX-ZYFG-0726-SM-5GIDX 14.1
GTEX-13U4I-1626-SM-5IFFR 14.0
GTEX-OOBJ-0926-SM-48TDO 14.0
GTEX-POMQ-0126-SM-48TD6 14.0
GTEX-12WSG-0926-SM-5EGIH 13.9
GTEX-U4B1-0526-SM-4DXTK 13.9
GTEX-147F3-0126-SM-5NQBJ 13.8
GTEX-14E6E-1226-SM-5S2R5 13.8
GTEX-W5WG-0626-SM-4SOID 13.8
GTEX-XXEK-0126-SM-4BRVU 13.7
GTEX-Y8LW-0126-SM-4VBS1 13.7
GTEX-11NSD-0426-SM-5N9CR 13.5
GTEX-Z9EW-0726-SM-5HL9H 13.5
GTEX-139YR-0426-SM-5IFFV 13.4
GTEX-P4QS-0926-SM-48TBS 13.4
GTEX-QV44-0126-SM-4R1KH 13.4
GTEX-ZVP2-0526-SM-51MSC 13.3
GTEX-UJHI-0126-SM-4IHLP 13.2
GTEX-X4LF-0226-SM-4QAS8 13.1
GTEX-ZZPU-0126-SM-5E446 13.1
GTEX-Q2AH-0226-SM-48U1I 13.0
GTEX-O5YT-0926-SM-48TDG 12.9
GTEX-11LCK-0126-SM-5A5M5 12.8
GTEX-XUJ4-0226-SM-4BOP8 12.7
GTEX-S3XE-0626-SM-4AD6B 12.6
GTEX-U3ZH-0126-SM-4DXUK 12.6
GTEX-YEC4-0126-SM-4W21T 12.6
GTEX-13X6H-0726-SM-5Q5BX 12.5
GTEX-QCQG-0226-SM-48U28 12.5
GTEX-U3ZN-0126-SM-4DXUM 12.5
GTEX-12WSN-0126-SM-5DUX5 12.4
GTEX-X3Y1-0126-SM-4PQZA 12.3
GTEX-Y3I4-0126-SM-4TT26 12.3
GTEX-ZV6S-0826-SM-5NQ6Z 12.3
GTEX-RUSQ-0126-SM-47JWV 12.2
GTEX-QV31-0126-SM-447BP 12.1
GTEX-OIZH-0926-SM-48TBR 12.0
GTEX-Q734-0226-SM-48U1A 11.9
GTEX-WFON-0126-SM-4LVM9 11.9
GTEX-QDVN-0526-SM-48TZ4 11.7
GTEX-S4Z8-0226-SM-4AD5K 11.5
GTEX-X585-1826-SM-4QAS3 11.5
GTEX-12WSJ-0526-SM-5GCOZ 11.4
GTEX-146FQ-0626-SM-5LU9U 11.4
GTEX-T5JW-0126-SM-4DM6K 11.1
GTEX-QLQW-0126-SM-447BK 11.0
GTEX-Y3IK-0126-SM-4WWE9 10.7
GTEX-UPK5-1626-SM-4JBHI 10.1
GTEX-XQ8I-1726-SM-4BOQB 9.7
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

26.6

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 26.6
FF:10025-101D7 39,50,70 years, male 26.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.