Tissue expression of SLC6A4 - Staining in esophagus

ESOPHAGUS - Expression summary

RNA expression

HPA:	3.1	TPM
GTEx:	0.8	RPKM
FANTOM5:	0.0	Tags Per Million

ESOPHAGUS - Annotated protein expression
Pending normal tissue analysis

ESOPHAGUS - HPA RNA-seq

Average TPM	3.1

Female, age 70

Sample 1
TPM: 3.3

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 1.9

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 4.2

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	0.8

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 0.8

Samples: 286

Max RPKM: 4.2
Min RPKM: 0
Std RPKM: 0.6
Median RPKM: 0.7

GTEX-11DXZ-1226-SM-5H11L

4.2

GTEX-T2IS-0826-SM-4DM6L

2.8

GTEX-13FTX-0526-SM-5IFGS

2.7

GTEX-YB5E-0926-SM-4WWDQ

2.5

GTEX-131XG-1026-SM-5GCMX

2.3

GTEX-TML8-1526-SM-4DXUX

2.3

GTEX-VJYA-0726-SM-4KL1T

2.2

GTEX-ZPU1-1426-SM-4WWFU

2.2

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	0.0

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 0.0

FF:10015-101C6

68,74,75 years, mixed

0.0