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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:41.6TPM
GTEx:8.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA013333

 

Antibody HPA014641

 

Endothelial cells

Not detected   Low  

Glial cells

Not detected   Low  

Neuronal cells

Not detected   Not detected  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

41.6

N/A Male, age 5
Sample 1
TPM: 39.8
overview Female, age 40
Sample 2
TPM: 43.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 41.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

8.5

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 9.2
Samples: 114

Max RPKM: 17
Min RPKM: 4.1
Std RPKM: 2.4
Median RPKM: 8.9
GTEX-WHSE-3026-SM-3P5ZH 17.0
GTEX-ZYFD-3026-SM-5E44C 15.1
GTEX-12ZZX-2926-SM-5GCOQ 13.7
GTEX-13VXU-2926-SM-5LU5C 13.7
GTEX-WL46-2926-SM-3LK82 13.6
GTEX-T5JC-2426-SM-3NMDB 13.4
GTEX-YFC4-3126-SM-5PNV6 13.4
GTEX-13FXS-3126-SM-5J2NN 12.9
GTEX-14BMV-3026-SM-5S2PQ 12.7
GTEX-12126-1026-SM-5P9JJ 12.6
GTEX-13NYS-3126-SM-5KLYV 12.5
GTEX-1313W-3126-SM-5LZUI 12.4
GTEX-13NYC-2826-SM-5K7WR 12.4
GTEX-11ZUS-2926-SM-5FQSL 12.1
GTEX-12ZZY-3026-SM-5GCOU 12.0
GTEX-13OVJ-2826-SM-5L3GW 11.9
GTEX-ZUA1-3026-SM-59HJC 11.9
GTEX-T2IS-3026-SM-32QPM 11.8
GTEX-WVLH-3026-SM-3MJG9 11.7
GTEX-13SLX-3126-SM-5S2Q5 11.6
GTEX-145MH-3026-SM-5Q5DZ 11.6
GTEX-NPJ8-1526-SM-2D7VU 11.4
GTEX-11WQK-3026-SM-5EQL6 11.3
GTEX-WZTO-2926-SM-3NM9I 11.3
GTEX-XOTO-3026-SM-4B65M 11.3
GTEX-13O3Q-2926-SM-5KM45 11.2
GTEX-11DXY-3226-SM-5GIDE 11.1
GTEX-PVOW-2526-SM-2XCF7 11.0
GTEX-WWYW-3126-SM-3NB39 11.0
GTEX-11PRG-2926-SM-5987A 10.9
GTEX-13OW6-3026-SM-5J2MI 10.9
GTEX-13FLW-1426-SM-5K7YE 10.8
GTEX-T6MN-2626-SM-32PMQ 10.7
GTEX-Z93S-2926-SM-57WB9 10.7
GTEX-111FC-3126-SM-5GZZ2 10.6
GTEX-11GSO-2926-SM-5HL73 10.6
GTEX-145MF-2726-SM-5O995 10.5
GTEX-12WSC-3026-SM-5GCNF 10.4
GTEX-14ASI-3026-SM-5S2PN 10.4
GTEX-Q2AG-2926-SM-2HMJ3 10.4
GTEX-R55F-1326-SM-5S2V4 10.3
GTEX-13OVH-3026-SM-5MR4N 10.2
GTEX-144GL-3026-SM-5Q5CW 10.2
GTEX-1128S-2726-SM-5H12C 10.0
GTEX-11ONC-2926-SM-5P9JM 10.0
GTEX-13JVG-3126-SM-5L3FH 10.0
GTEX-145LS-3126-SM-5Q5BY 9.9
GTEX-OXRN-2426-SM-2I5EQ 9.7
GTEX-1192X-3126-SM-5N9BY 9.4
GTEX-132Q8-3026-SM-5PNVG 9.3
GTEX-13FHP-3026-SM-5IJBS 9.2
GTEX-13OW8-2826-SM-5L3GC 9.2
GTEX-TSE9-3026-SM-3DB76 9.2
GTEX-X585-3026-SM-46MWF 9.1
GTEX-117XS-3026-SM-5N9CA 9.0
GTEX-11NUK-2926-SM-5A5MD 9.0
GTEX-11DXW-1126-SM-5H12Q 8.9
GTEX-13FHO-3026-SM-5J1O9 8.9
GTEX-13JUV-2926-SM-5LZX7 8.8
GTEX-RNOR-2326-SM-2TF4I 8.7
GTEX-X4XX-3026-SM-3NMB2 8.7
GTEX-YJ89-3026-SM-5IFJI 8.7
GTEX-Y111-2726-SM-4TT3N 8.6
GTEX-13X6K-2926-SM-5Q5D5 8.5
GTEX-144FL-3026-SM-5O99C 8.5
GTEX-12WSH-3026-SM-5CVNI 8.4
GTEX-ZAJG-3126-SM-5HL9J 8.4
GTEX-11TTK-2926-SM-5PNYP 8.3
GTEX-QVJO-1426-SM-2S1QY 8.3
GTEX-ZZPT-3026-SM-5GZXH 8.2
GTEX-139T8-1026-SM-5J2MC 8.1
GTEX-11EMC-3226-SM-5EGKW 8.0
GTEX-NPJ7-2726-SM-2I3FT 8.0
GTEX-ZAK1-3026-SM-5S2MJ 8.0
GTEX-11GS4-3126-SM-5A5LH 7.9
GTEX-ZVT3-3026-SM-5E43N 7.9
GTEX-131YS-3126-SM-5KLYT 7.8
GTEX-Y8DK-0826-SM-4TT3T 7.8
GTEX-1399T-3026-SM-5KLZC 7.7
GTEX-14A5I-2926-SM-5Q5CQ 7.7
GTEX-UTHO-3026-SM-3GAFB 7.6
GTEX-RU72-3026-SM-5SI7Y 7.5
GTEX-11OC5-0726-SM-5P9JK 7.4
GTEX-11OF3-2926-SM-5HL78 7.4
GTEX-12ZZZ-3026-SM-5BC67 7.4
GTEX-13O3O-3126-SM-5KM3H 7.4
GTEX-XLM4-3026-SM-4AT6L 7.3
GTEX-12WSD-3126-SM-5HL7P 7.1
GTEX-QMR6-1426-SM-32PLA 7.1
GTEX-13QIC-2926-SM-5J2NF 7.0
GTEX-1445S-3026-SM-5O9BR 7.0
GTEX-11O72-2926-SM-5BC4V 6.9
GTEX-11GSP-3226-SM-5986O 6.8
GTEX-11EI6-3026-SM-5GZZO 6.7
GTEX-13NYB-3026-SM-5IJD7 6.7
GTEX-12ZZW-2926-SM-5LZUP 6.6
GTEX-131XW-3126-SM-5LZUC 6.6
GTEX-13PL6-3126-SM-5LUAR 6.6
GTEX-13X6J-3026-SM-5Q5CU 6.6
GTEX-145MG-3026-SM-5RQJA 6.6
GTEX-11NV4-2126-SM-5N9DS 6.4
GTEX-QDT8-2926-SM-32PKC 6.4
GTEX-13G51-3026-SM-5IJB8 6.3
GTEX-13IVO-2926-SM-5L3CZ 6.3
GTEX-QVUS-2826-SM-3GADB 6.3
GTEX-13PVQ-3026-SM-5SI93 6.0
GTEX-N7MT-1126-SM-5SI7V 5.8
GTEX-PWO3-0926-SM-2I5EY 5.8
GTEX-1117F-3226-SM-5N9CT 5.7
GTEX-12WSA-2926-SM-5EQ4D 5.7
GTEX-13OW7-3026-SM-5L3GY 5.7
GTEX-147GR-3026-SM-5S2ML 5.5
GTEX-13S7M-3126-SM-5RQJQ 5.0
GTEX-ZE7O-3126-SM-5HL5X 4.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 7.7
Samples: 108

Max RPKM: 15.2
Min RPKM: 1.2
Std RPKM: 3
Median RPKM: 7.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 15.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 14.4
GTEX-131XH-0011-R10a-SM-5EGLJ 13.4
GTEX-WL46-0011-R10A-SM-3MJFQ 13.3
GTEX-WZTO-0011-R10B-SM-4E3KB 13.3
GTEX-12WSM-0011-R10a-SM-5DUWV 12.9
GTEX-WVLH-0011-R10A-SM-3MJFM 12.9
GTEX-12WSE-0011-R10b-SM-5P9JV 12.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 12.4
GTEX-T5JC-0011-R10A-SM-32PM2 12.4
GTEX-13FHO-0011-R10b-SM-5J2MM 12.3
GTEX-1313W-0011-R10b-SM-5DUXA 12.1
GTEX-13N2G-0011-R10a-SM-5MR34 12.0
GTEX-145MG-0011-R10a-SM-5PNWG 11.7
GTEX-YFC4-0011-R10a-SM-4SOK5 11.6
GTEX-ZF28-0011-R10a-SM-4WWEH 11.6
GTEX-NL3H-0011-R10A-SM-2I3E9 11.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 11.5
GTEX-145MH-0011-R10b-SM-5PNUK 11.2
GTEX-T6MN-0011-R10A-SM-32QP7 11.2
GTEX-S7SE-0011-R10A-SM-2XCDF 11.0
GTEX-X585-0011-R10A-SM-46MUY 11.0
GTEX-13X6K-0011-R10a-SM-5P9JR 10.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 10.7
GTEX-N7MS-0011-R10A-SM-2HMJK 10.4
GTEX-131YS-0011-R10b-SM-5EQ5N 10.1
GTEX-13OVL-0011-R10a-SM-5L3GS 10.1
GTEX-XLM4-0011-R10A-SM-4AT5P 9.5
GTEX-14BIL-0011-R10a-SM-5SI75 9.4
GTEX-13S7M-0011-R10b-SM-5PNZB 9.3
GTEX-13X6J-0011-R10b-SM-5PNWA 9.2
GTEX-145LS-0011-R10a-SM-5PNUQ 9.1
GTEX-13X6I-0011-R10a-SM-5PNWI 9.0
GTEX-X4XX-0011-R10B-SM-46MWO 9.0
GTEX-12126-0011-R10b-SM-5BC6T 8.9
GTEX-12WSF-0011-R10a-SM-5LZVH 8.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 8.7
GTEX-11WQK-0011-R10a-SM-5BC6R 8.5
GTEX-QDT8-0011-R10A-SM-32PKG 8.5
GTEX-Y8DK-0011-R10A-SM-4SOK1 8.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 8.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC 8.4
GTEX-YJ89-0011-R10a-SM-4SOK9 8.4
GTEX-13FLW-0011-R10b-SM-5LZZF 8.2
GTEX-X4EP-0011-R10B-SM-4QASJ 8.2
GTEX-NL4W-0011-R10A-SM-2I3DY 8.1
GTEX-13JUV-0011-R10b-SM-5LZXR 8.0
GTEX-13O3Q-0011-R10b-SM-5KM39 8.0
GTEX-13QJC-0011-R10a-SM-5SI63 8.0
GTEX-147GR-0011-R10b-SM-5S2UM 7.7
GTEX-WWYW-0011-R10A-SM-3NB35 7.4
GTEX-Z93S-0011-R10a-SM-4RGNM 7.4
GTEX-11H98-0011-R10b-SM-5NQ98 7.3
GTEX-11ZUS-0011-R10b-SM-5BC79 7.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 7.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 7.3
GTEX-13FXS-0011-R10a-SM-5J2MA 7.2
GTEX-13G51-0011-R10b-SM-5LZYF 7.2
GTEX-13QIC-0011-R10a-SM-5O9C7 7.0
GTEX-13CZV-0011-R10b-SM-5LZYD 6.9
GTEX-13OW8-0011-R10a-SM-5L3H6 6.9
GTEX-XMD1-0011-R10A-SM-4AT4A 6.9
GTEX-QMR6-0011-R10A-SM-32PKO 6.7
GTEX-13NYB-0011-R10a-SM-5KM43 6.6
GTEX-1445S-0011-R10a-SM-5PNWB 6.6
GTEX-OXRN-0011-R10A-SM-2I5GC 6.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 6.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 6.3
GTEX-13N1W-0011-R10b-SM-5MR4H 6.3
GTEX-ZDXO-0011-R10a-SM-4WWD8 6.3
GTEX-12WSC-0011-R10a-SM-5GU57 6.2
GTEX-12WSH-0011-R10a-SM-5LZUS 6.2
GTEX-13OW6-0011-R10a-SM-5L3HE 6.2
GTEX-N7MT-0011-R10A-SM-2I3E1 6.2
GTEX-QVUS-0011-R10A-SM-3GIK3 6.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 6.0
GTEX-TSE9-0011-R10A-SM-3DB7O 5.9
GTEX-145LU-0011-R10a-SM-5PNWJ 5.8
GTEX-ZAB4-0011-R10a-SM-4SOKH 5.8
GTEX-ZUA1-0011-R10a-SM-51MT6 5.8
GTEX-13SLW-0011-R10a-SM-5S2UI 5.5
GTEX-11WQC-0011-R10a-SM-57WCT 5.3
GTEX-147F4-0011-R10b-SM-5S2WC 5.3
GTEX-11GSP-0011-R10a-SM-5NQ7J 5.2
GTEX-ZXG5-0011-R10a-SM-57WDD 5.0
GTEX-13OW7-0011-R10a-SM-5L3H3 4.9
GTEX-13NYS-0011-R10a-SM-5MR4S 4.7
GTEX-13NZA-0011-R10b-SM-5KM54 4.7
GTEX-14BIN-0011-R10a-SM-5S2UA 4.6
GTEX-13FTZ-0011-R10b-SM-5KLZS 4.5
GTEX-ZE7O-0011-R10a-SM-57WAZ 4.5
GTEX-12WSA-0011-R10b-SM-5P9ET 4.2
GTEX-1477Z-0011-R10b-SM-5S2RF 4.2
GTEX-139TS-0011-R10a-SM-5K7TU 4.1
GTEX-13JVG-0011-R10b-SM-5KM2P 4.1
GTEX-13SLX-0011-R10a-SM-5P9HV 4.1
GTEX-ZVT3-0011-R10b-SM-57WB6 4.0
GTEX-X261-0011-R10B-SM-4E3JT 3.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 3.6
GTEX-ZV68-0011-R10a-SM-51MT7 3.5
GTEX-P44H-0011-R10A-SM-2XCEK 3.4
GTEX-13IVO-0011-R10a-SM-5LZY3 3.3
GTEX-13O3O-0011-R10a-SM-5LUA9 3.2
GTEX-14753-0011-R10b-SM-5S2WE 3.2
GTEX-OXRO-0011-R10A-SM-2I5EH 3.1
GTEX-RVPU-0011-R10A-SM-2XCAH 2.1
GTEX-12WSD-0011-R10b-SM-5GU79 2.0
GTEX-131XW-0011-R10a-SM-5DUVA 1.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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