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TNFAIP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:19.8TPM
GTEx:7.1RPKM
FANTOM5:39.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA013333

  

Antibody HPA014641

  

Endothelial cells

 Low   Low  

Glandular cells

 Low   Medium  

Peripheral nerve/ganglion

 Not detected   Low  
   
   
   

COLON - HPA RNA-seq

Average TPM

19.8
overview Male, age 54
Sample 1
TPM: 20.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 18.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 27.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 19.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 15.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 22.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 18.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 15.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 24.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 16.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 21.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 19.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 18.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.1

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 7.1
Samples: 149

Max RPKM: 13.6
Min RPKM: 2
Std RPKM: 2
Median RPKM: 6.9
GTEX-11WQK-2526-SM-5CVL8 13.6
GTEX-11TT1-0926-SM-5GU5M 12.6
GTEX-11I78-1326-SM-5PNY9 12.5
GTEX-14A5H-1626-SM-5SIAN 11.3
GTEX-YJ8A-1726-SM-5P9IQ 11.3
GTEX-132AR-2826-SM-5IJFV 10.9
GTEX-ZLFU-1426-SM-4WWEU 10.7
GTEX-11EM3-1626-SM-5N9CO 10.4
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 7.1
Samples: 196

Max RPKM: 16.7
Min RPKM: 3.1
Std RPKM: 2
Median RPKM: 6.7
GTEX-13OVG-1426-SM-5K7VP 16.7
GTEX-14ICL-1226-SM-5S2RD 14.6
GTEX-13CF3-1426-SM-5K7YY 13.3
GTEX-144GM-1226-SM-5LU52 12.9
GTEX-11WQK-2126-SM-5EQME 12.8
GTEX-13W3W-2126-SM-5K7UX 12.5
GTEX-13O3P-2326-SM-5KM55 12.1
GTEX-117YW-1826-SM-5PNY5 11.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

39.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 39.8
FF:10014-101C5 62,83,84 years, mixed 39.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.