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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:307.4RPKM
FANTOM5:388.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Low
 

Antibody staining

Antibody HPA003282

 

Antibody CAB020828

 

Glial cells

Medium   Medium  

Neuronal cells

Not detected   Low  
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

307.4

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 307.4
Samples: 117

Max RPKM: 666.9
Min RPKM: 88.5
Std RPKM: 98.3
Median RPKM: 297.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 666.9
GTEX-13JVG-0011-R5a-SM-5MR4O 526.4
GTEX-1445S-0011-R5a-SM-5PNUS 518.5
GTEX-139TT-0011-R5b-SM-5K7W8 513.6
GTEX-X261-0011-R5A-SM-3NMB4 510.2
GTEX-139T8-0011-R5b-SM-5J1MO 502.4
GTEX-13CZV-0011-R5a-SM-5K7XA 496.4
GTEX-11H98-0011-R5b-SM-57WCF 487.9
GTEX-13FLV-0011-R5a-SM-5LZWT 485.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 449.7
GTEX-13OVH-0011-R5b-SM-5KM4L 447.2
GTEX-TSE9-0011-R5A-SM-3DB7J 444.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 435.1
GTEX-T6MN-0011-R5A-SM-32QPD 432.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 418.1
GTEX-13X6K-0011-R5b-SM-5PNUE 411.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 411.7
GTEX-ZV68-0011-R5a-SM-4YCDW 407.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 401.4
GTEX-13NYB-0011-R5a-SM-5MR45 401.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 393.0
GTEX-12WSA-0011-R5b-SM-5GU5I 391.1
GTEX-RU72-0011-R5A-SM-2TF6U 387.9
GTEX-13CIG-0011-R5b-SM-5L3F2 378.0
GTEX-13NYS-0011-R5a-SM-5MR4D 374.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 372.0
GTEX-12WSB-0011-R5b-SM-5GU67 361.8
GTEX-12ZZX-0011-R5a-SM-5HL89 358.8
GTEX-XOTO-0011-R5A-SM-4B657 357.7
GTEX-ZXG5-0011-R5b-SM-57WBN 354.2
GTEX-NPJ7-0011-R5a-SM-33HBK 353.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 349.7
GTEX-N7MT-0011-R5a-SM-2I3G6 344.1
GTEX-R55E-0011-R5A-SM-2TC5N 343.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 340.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 339.9
GTEX-ZVT3-0011-R5a-SM-51MSI 339.6
GTEX-P44H-0011-R5A-SM-2XCEX 336.8
GTEX-13112-0011-R5b-SM-5DUV8 333.4
GTEX-WVLH-0011-R5A-SM-3MJFW 333.3
GTEX-ZUA1-0011-R5b-SM-51MTG 331.9
GTEX-OXRN-0011-R5A-SM-2I5EF 330.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 324.8
GTEX-13OVL-0011-R5b-SM-5L3FU 323.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 321.0
GTEX-11GSP-0011-R5a-SM-57WBE 320.0
GTEX-13OW7-0011-R5b-SM-5O9DM 319.2
GTEX-13X6I-0011-R5a-SM-5PNWW 316.9
GTEX-13FLW-0011-R5a-SM-5LZX6 315.4
GTEX-13OW6-0011-R5a-SM-5O9BK 311.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 310.3
GTEX-11UD1-0011-R5b-SM-5P9FP 309.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 307.5
GTEX-T5JC-0011-R5A-SM-32PLK 303.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 302.9
GTEX-RVPV-0011-R5A-SM-2TF69 302.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 301.6
GTEX-144GO-0011-R5a-SM-5PNUR 300.7
GTEX-NL3H-0011-R5a-SM-2I3GB 297.2
GTEX-13SLX-0011-R5a-SM-5O9BV 295.5
GTEX-11WQC-0011-R5a-SM-5BC74 291.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 288.5
GTEX-YFC4-0011-R5a-SM-4RGLR 287.6
GTEX-13CF2-0011-R5a-SM-5LZWS 284.6
GTEX-14BIM-0011-R5b-SM-5S2RM 282.3
GTEX-S7PM-0011-R5A-SM-3NM8G 281.7
GTEX-139TS-0011-R5b-SM-5J2MZ 281.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 281.2
GTEX-145MG-0011-R5b-SM-5S2VU 279.0
GTEX-13FXS-0011-R5b-SM-5LZYE 278.1
GTEX-ZE7O-0011-R5a-SM-57WBO 277.4
GTEX-13OW5-0011-R5b-SM-5L3FR 274.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 272.7
GTEX-13S7M-0011-R5b-SM-5P9HS 272.0
GTEX-RVPU-0011-R5A-SM-2XCAD 271.1
GTEX-144GL-0011-R5b-SM-5PNUJ 268.9
GTEX-QMR6-0011-R5A-SM-32PKT 266.7
GTEX-14BIN-0011-R5b-SM-5SI78 266.2
GTEX-S7SE-0011-R5A-SM-2XCDA 264.0
GTEX-WZTO-0011-R5B-SM-3NMC5 261.5
GTEX-QVJO-0011-R5A-SM-2S1QM 260.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 258.2
GTEX-XMD1-0011-R5A-SM-4AT47 255.2
GTEX-132Q8-0011-R5a-SM-5IJDM 253.1
GTEX-1477Z-0011-R5b-SM-5PNUO 252.2
GTEX-N7MS-0011-R5a-SM-2HMK8 250.2
GTEX-13NZA-0011-R5b-SM-5KM4K 249.1
GTEX-12WSD-0011-R5b-SM-5CVNG 246.0
GTEX-131YS-0011-R5b-SM-5K7YB 245.2
GTEX-13JUV-0011-R5a-SM-5LZY5 244.0
GTEX-NL4W-0011-R5a-SM-2I3GD 241.2
GTEX-13FHP-0011-R5b-SM-5LZY2 237.2
GTEX-13O3O-0011-R5b-SM-5KM44 235.9
GTEX-13X6J-0011-R5b-SM-5PNWT 235.4
GTEX-YJ89-0011-R5a-SM-4V6GM 230.1
GTEX-12WSC-0011-R5b-SM-5CVNS 229.5
GTEX-14ABY-0011-R5b-SM-5SI7B 227.8
GTEX-12WSH-0011-R5b-SM-5P9F3 227.3
GTEX-13VXU-0011-R5a-SM-5O9D7 225.7
GTEX-145LS-0011-R5a-SM-5SI65 225.4
GTEX-13G51-0011-R5a-SM-5L3EB 222.2
GTEX-1313W-0011-R5b-SM-5L3EP 215.6
GTEX-145MH-0011-R5a-SM-5P9JT 212.0
GTEX-11NV4-0011-R5a-SM-5NQ88 210.6
GTEX-11OF3-0011-R5a-SM-57WB4 209.4
GTEX-X4XX-0011-R5A-SM-46MWN 206.9
GTEX-WWYW-0011-R5A-SM-3NB3E 204.2
GTEX-PVOW-0011-R5A-SM-32PL7 188.2
GTEX-UTHO-0011-R5A-SM-3GIJD 183.6
GTEX-12WSF-0011-R5a-SM-5HL8K 174.7
GTEX-1399T-0011-R5b-SM-5IJDK 162.3
GTEX-T2IS-0011-R5A-SM-32QP4 148.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 124.2
GTEX-OHPN-0011-R5A-SM-2I5FF 109.0
GTEX-X585-0011-R5A-SM-46MVI 98.2
GTEX-WL46-0011-R5A-SM-3LK6V 95.7
GTEX-Z93S-0011-R5b-SM-4RGNI 88.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

388.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 388.7
FF:10164-103B2 76 years, female 474.2
FF:10379-105H1 89 years, female 303.3

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