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TISSUE ATLAS PRIMARY DATA LIVER
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:38.8TPM
GTEx:23.2RPKM
FANTOM5:39.7Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Not detected
 

Antibody staining

Antibody HPA003282

 

Antibody CAB020828

 

Bile duct cells

Not detected   Not detected  

Hepatocytes

Not detected   Not detected  
   
   
   

LIVER - HPA RNA-seq

Average TPM

38.8

N/A Female, age 60
Sample 1
TPM: 41.2
overview Male, age 54
Sample 2
TPM: 24.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 49.3
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 31.2
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 22.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 37.1
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 69.1
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 42.5
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 12.1
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 58.2
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

23.2

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 23.2
Samples: 119

Max RPKM: 90.1
Min RPKM: 5.4
Std RPKM: 12.4
Median RPKM: 20.6
GTEX-11NV4-1326-SM-5HL6V 90.1
GTEX-X4EP-1026-SM-4QAS5 71.1
GTEX-13113-1326-SM-5GCOI 56.4
GTEX-11ZTS-1426-SM-5EQMM 52.7
GTEX-13O3O-1826-SM-5IFGW 49.5
GTEX-145MO-2326-SM-5NQ9K 46.5
GTEX-14753-1626-SM-5NQ9L 46.1
GTEX-14A5I-1726-SM-5QGQ5 43.7
GTEX-12WSD-1426-SM-5GCN9 40.3
GTEX-11DXY-0526-SM-5EGGQ 39.9
GTEX-139TU-0826-SM-5IJFG 38.2
GTEX-132NY-0926-SM-5P9G3 38.0
GTEX-PX3G-0826-SM-48TZS 36.7
GTEX-13N11-0926-SM-5IJG2 36.2
GTEX-13FLV-0326-SM-5N9DJ 34.2
GTEX-REY6-1226-SM-48FDR 33.9
GTEX-YB5E-0326-SM-5IFHU 33.7
GTEX-147F4-1426-SM-5LUA8 32.6
GTEX-11DXZ-0126-SM-5EGGY 32.3
GTEX-UPIC-0926-SM-4IHLV 31.2
GTEX-ZTPG-1426-SM-51MT3 31.0
GTEX-QV44-0326-SM-4R1KD 30.0
GTEX-11OF3-0726-SM-5BC4Z 29.7
GTEX-145MF-0826-SM-5QGQA 29.6
GTEX-ZF2S-3026-SM-4WWCH 29.4
GTEX-OOBJ-0826-SM-3NB2K 29.1
GTEX-13OW6-2626-SM-5IFF2 29.0
GTEX-12WSI-0226-SM-5GCNA 28.7
GTEX-14AS3-0126-SM-5Q5F4 28.1
GTEX-1497J-0726-SM-5Q5D1 27.5
GTEX-ZYY3-0626-SM-5NQ6W 27.5
GTEX-P78B-1326-SM-3P611 26.8
GTEX-13PVR-0126-SM-5S2PY 26.6
GTEX-RN64-1826-SM-48FDV 26.6
GTEX-Y5V5-0926-SM-4VBPZ 26.5
GTEX-RTLS-1326-SM-46MUN 26.3
GTEX-13QJC-0726-SM-5RQJK 26.0
GTEX-UPK5-1426-SM-4JBHH 26.0
GTEX-11ZUS-2526-SM-59872 25.8
GTEX-13SLX-1226-SM-5S2Q6 25.7
GTEX-ZPU1-0826-SM-57WG2 25.6
GTEX-TKQ2-1726-SM-4DXUP 25.4
GTEX-QDVN-0826-SM-48TZ2 25.2
GTEX-QEG4-1826-SM-4R1JN 25.1
GTEX-X4EO-1126-SM-4QARQ 24.4
GTEX-QESD-2026-SM-447BI 24.2
GTEX-13FTZ-0726-SM-5IFFY 23.8
GTEX-12WSL-0226-SM-5CVMJ 23.5
GTEX-ZF29-2026-SM-4WWB7 23.0
GTEX-WQUQ-1926-SM-4OOSA 22.9
GTEX-WZTO-0626-SM-4PQYY 22.7
GTEX-R53T-0326-SM-48FEC 22.4
GTEX-144GM-1326-SM-5LU5E 22.3
GTEX-SJXC-1226-SM-4DM78 22.3
GTEX-12KS4-1326-SM-5LUB3 22.1
GTEX-ZAB4-0826-SM-5LU9D 21.4
GTEX-13NYB-1026-SM-5IFH3 21.2
GTEX-Y5LM-0426-SM-4VBRO 21.1
GTEX-139TS-1426-SM-5IFJD 20.7
GTEX-RU72-1426-SM-46MUF 20.6
GTEX-Q734-0326-SM-48U15 20.1
GTEX-1269C-0626-SM-5FQSS 20.0
GTEX-YECK-1926-SM-4W21H 20.0
GTEX-131XE-0326-SM-5LZVO 19.6
GTEX-13NZB-0626-SM-5IFH6 19.2
GTEX-14DAQ-1726-SM-5S2R2 19.1
GTEX-ZVT3-1626-SM-5GU66 18.8
GTEX-1399T-0826-SM-5IFES 18.7
GTEX-13NZ9-1326-SM-5MR3V 18.6
GTEX-131XH-0626-SM-5LZWH 18.5
GTEX-X261-1726-SM-4PQYT 18.3
GTEX-131YS-1626-SM-5HL6C 18.1
GTEX-11WQC-0726-SM-5EQMR 18.0
GTEX-XBEC-1526-SM-4AT68 17.9
GTEX-XOTO-0826-SM-4B65O 17.7
GTEX-YFC4-1526-SM-5IFJS 17.7
GTEX-ZZPU-0426-SM-5GZYH 17.7
GTEX-S32W-1926-SM-4AD63 17.5
GTEX-ZVT4-0626-SM-5E45T 17.3
GTEX-11NUK-1226-SM-5P9GM 17.1
GTEX-11ZVC-0726-SM-5FQT9 16.9
GTEX-13VXU-0926-SM-5IFFH 16.2
GTEX-U3ZN-0226-SM-3DB8D 15.8
GTEX-UTHO-2426-SM-4JBHD 15.6
GTEX-14C38-1526-SM-5RQJ7 15.4
GTEX-RWSA-1426-SM-47JXA 15.2
GTEX-11EQ9-0526-SM-5A5JZ 15.0
GTEX-ZYT6-0626-SM-5E45V 15.0
GTEX-Z9EW-0426-SM-5CVM9 14.8
GTEX-YEC4-0826-SM-5P9FV 14.6
GTEX-T6MN-1226-SM-3NMA5 14.5
GTEX-14E1K-0326-SM-5S2PE 14.1
GTEX-1399R-1226-SM-5P9GF 13.9
GTEX-X4XY-1626-SM-46MVN 13.9
GTEX-X3Y1-2726-SM-4PQZH 13.7
GTEX-RM2N-1926-SM-48FCU 13.4
GTEX-QEL4-1226-SM-447A4 13.3
GTEX-139YR-0226-SM-5IFEM 13.2
GTEX-S33H-1626-SM-4AD68 13.0
GTEX-WYVS-1926-SM-4PQZ2 12.9
GTEX-VUSG-0126-SM-4KL1X 12.7
GTEX-13FTW-1126-SM-5J2NV 12.5
GTEX-145LU-1326-SM-5LU9N 12.5
GTEX-11GSP-0626-SM-5986T 12.4
GTEX-RNOR-1426-SM-48FDJ 12.3
GTEX-12WSG-0626-SM-5FQTQ 11.9
GTEX-12696-0826-SM-5EGGE 11.8
GTEX-ZAB5-0426-SM-5CVMI 11.8
GTEX-Q2AG-1126-SM-48U1P 11.6
GTEX-146FH-1526-SM-5NQBU 11.5
GTEX-13112-1426-SM-5EGH8 11.3
GTEX-S4Z8-0526-SM-4AD4T 11.2
GTEX-ZVP2-0626-SM-51MSO 11.1
GTEX-13N2G-0926-SM-5IFGJ 10.9
GTEX-147JS-1126-SM-5RQIW 10.1
GTEX-1212Z-0226-SM-59HLF 9.3
GTEX-12WSM-0726-SM-5GCOW 8.0
GTEX-WFON-1726-SM-4LVMQ 7.5
GTEX-12ZZZ-1326-SM-59HKW 5.4
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

39.7

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 39.7
FF:10018-101C9 64,69,70 years, mixed 39.7

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