We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
UGDH
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:73.1TPM
GTEx:30.1RPKM
FANTOM5:284.7Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:High
 

Antibody staining

Antibody HPA036656

 

Antibody HPA036657

 

Antibody CAB034444

 

Bile duct cells

Not detected   Not detected   Low  

Hepatocytes

High   High   High  
     
     
     

LIVER - HPA RNA-seq

Average TPM

73.1

N/A Female, age 60
Sample 1
TPM: 74.7
overview Male, age 54
Sample 2
TPM: 122.3
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 50.1
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 82.2
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 52.4
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 78.3
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 80.7
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 43.4
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 70.8
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 75.6
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

30.1

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 30.1
Samples: 119

Max RPKM: 166.3
Min RPKM: 8.3
Std RPKM: 20.4
Median RPKM: 25.2
GTEX-13NZ9-1326-SM-5MR3V 166.3
GTEX-R53T-0326-SM-48FEC 102.1
GTEX-YFC4-1526-SM-5IFJS 93.8
GTEX-U3ZN-0226-SM-3DB8D 71.4
GTEX-P78B-1326-SM-3P611 69.2
GTEX-ZTPG-1426-SM-51MT3 66.5
GTEX-Y5LM-0426-SM-4VBRO 58.0
GTEX-146FH-1526-SM-5NQBU 55.6
GTEX-147JS-1126-SM-5RQIW 55.0
GTEX-139TS-1426-SM-5IFJD 52.0
GTEX-REY6-1226-SM-48FDR 49.6
GTEX-ZF29-2026-SM-4WWB7 49.2
GTEX-13QJC-0726-SM-5RQJK 48.9
GTEX-ZAB5-0426-SM-5CVMI 48.7
GTEX-11WQC-0726-SM-5EQMR 48.4
GTEX-131XE-0326-SM-5LZVO 47.9
GTEX-QEL4-1226-SM-447A4 47.2
GTEX-14AS3-0126-SM-5Q5F4 46.1
GTEX-Z9EW-0426-SM-5CVM9 44.8
GTEX-1497J-0726-SM-5Q5D1 44.5
GTEX-1399R-1226-SM-5P9GF 43.2
GTEX-QDVN-0826-SM-48TZ2 41.7
GTEX-YB5E-0326-SM-5IFHU 41.4
GTEX-12WSM-0726-SM-5GCOW 41.0
GTEX-13N11-0926-SM-5IJG2 40.9
GTEX-147F4-1426-SM-5LUA8 40.5
GTEX-14A5I-1726-SM-5QGQ5 40.3
GTEX-X4EO-1126-SM-4QARQ 39.9
GTEX-11DXY-0526-SM-5EGGQ 36.1
GTEX-1269C-0626-SM-5FQSS 36.1
GTEX-ZF2S-3026-SM-4WWCH 34.9
GTEX-ZVT4-0626-SM-5E45T 34.5
GTEX-13PVR-0126-SM-5S2PY 34.1
GTEX-Y5V5-0926-SM-4VBPZ 33.6
GTEX-X261-1726-SM-4PQYT 32.5
GTEX-Q734-0326-SM-48U15 31.6
GTEX-S33H-1626-SM-4AD68 31.5
GTEX-139TU-0826-SM-5IJFG 31.4
GTEX-ZYY3-0626-SM-5NQ6W 31.3
GTEX-13VXU-0926-SM-5IFFH 31.0
GTEX-11EQ9-0526-SM-5A5JZ 30.9
GTEX-PX3G-0826-SM-48TZS 30.2
GTEX-X4EP-1026-SM-4QAS5 30.0
GTEX-ZVT3-1626-SM-5GU66 30.0
GTEX-139YR-0226-SM-5IFEM 29.9
GTEX-S32W-1926-SM-4AD63 29.9
GTEX-13O3O-1826-SM-5IFGW 29.6
GTEX-13NYB-1026-SM-5IFH3 29.5
GTEX-145MF-0826-SM-5QGQA 29.5
GTEX-UPK5-1426-SM-4JBHH 29.0
GTEX-RM2N-1926-SM-48FCU 27.6
GTEX-QV44-0326-SM-4R1KD 27.1
GTEX-YEC4-0826-SM-5P9FV 26.9
GTEX-11ZVC-0726-SM-5FQT9 26.7
GTEX-131YS-1626-SM-5HL6C 26.2
GTEX-X3Y1-2726-SM-4PQZH 26.0
GTEX-12WSI-0226-SM-5GCNA 25.6
GTEX-13FTW-1126-SM-5J2NV 25.6
GTEX-14C38-1526-SM-5RQJ7 25.5
GTEX-X4XY-1626-SM-46MVN 25.2
GTEX-Q2AG-1126-SM-48U1P 24.0
GTEX-RU72-1426-SM-46MUF 24.0
GTEX-ZVP2-0626-SM-51MSO 23.8
GTEX-13FTZ-0726-SM-5IFFY 23.7
GTEX-RTLS-1326-SM-46MUN 23.5
GTEX-12WSG-0626-SM-5FQTQ 23.1
GTEX-11OF3-0726-SM-5BC4Z 22.7
GTEX-UPIC-0926-SM-4IHLV 22.7
GTEX-13SLX-1226-SM-5S2Q6 22.6
GTEX-13N2G-0926-SM-5IFGJ 22.2
GTEX-WZTO-0626-SM-4PQYY 22.1
GTEX-ZPU1-0826-SM-57WG2 22.1
GTEX-WQUQ-1926-SM-4OOSA 22.0
GTEX-YECK-1926-SM-4W21H 21.6
GTEX-12696-0826-SM-5EGGE 20.6
GTEX-TKQ2-1726-SM-4DXUP 20.6
GTEX-11GSP-0626-SM-5986T 20.4
GTEX-ZZPU-0426-SM-5GZYH 20.3
GTEX-13113-1326-SM-5GCOI 19.4
GTEX-T6MN-1226-SM-3NMA5 19.3
GTEX-14E1K-0326-SM-5S2PE 18.9
GTEX-OOBJ-0826-SM-3NB2K 18.9
GTEX-ZYT6-0626-SM-5E45V 18.9
GTEX-S4Z8-0526-SM-4AD4T 18.7
GTEX-11NV4-1326-SM-5HL6V 18.4
GTEX-13FLV-0326-SM-5N9DJ 18.4
GTEX-13OW6-2626-SM-5IFF2 18.4
GTEX-132NY-0926-SM-5P9G3 18.3
GTEX-145LU-1326-SM-5LU9N 17.8
GTEX-RWSA-1426-SM-47JXA 17.7
GTEX-144GM-1326-SM-5LU5E 17.6
GTEX-13NZB-0626-SM-5IFH6 17.4
GTEX-11ZTS-1426-SM-5EQMM 17.1
GTEX-RN64-1826-SM-48FDV 17.1
GTEX-QESD-2026-SM-447BI 16.8
GTEX-RNOR-1426-SM-48FDJ 16.4
GTEX-12WSL-0226-SM-5CVMJ 16.2
GTEX-1399T-0826-SM-5IFES 15.8
GTEX-VUSG-0126-SM-4KL1X 15.5
GTEX-QEG4-1826-SM-4R1JN 15.3
GTEX-XBEC-1526-SM-4AT68 14.9
GTEX-12KS4-1326-SM-5LUB3 14.8
GTEX-12ZZZ-1326-SM-59HKW 14.7
GTEX-145MO-2326-SM-5NQ9K 14.4
GTEX-WYVS-1926-SM-4PQZ2 14.1
GTEX-13112-1426-SM-5EGH8 14.0
GTEX-XOTO-0826-SM-4B65O 14.0
GTEX-SJXC-1226-SM-4DM78 13.6
GTEX-WFON-1726-SM-4LVMQ 13.6
GTEX-UTHO-2426-SM-4JBHD 13.4
GTEX-14DAQ-1726-SM-5S2R2 13.0
GTEX-11DXZ-0126-SM-5EGGY 12.6
GTEX-1212Z-0226-SM-59HLF 12.0
GTEX-11NUK-1226-SM-5P9GM 11.9
GTEX-ZAB4-0826-SM-5LU9D 11.7
GTEX-131XH-0626-SM-5LZWH 10.4
GTEX-14753-1626-SM-5NQ9L 9.6
GTEX-11ZUS-2526-SM-59872 9.2
GTEX-12WSD-1426-SM-5GCN9 8.3
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

284.7

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 284.7
FF:10018-101C9 64,69,70 years, mixed 284.7

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.