Tissue expression of VWA5A - Summary - The Human Protein Atlas

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VWA5A

TISSUE

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CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	VWA5A
Gene description	Von Willebrand factor A domain containing 5A
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	5
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Nuclear expression in most tissues.

DATA RELIABILITY
Data reliability description	Antibody staining mainly not consistent with RNA expression data. Pending external verification.
Reliability score	Uncertain based on 2 antibodies. HPA037813 , HPA037814
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

N/A

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	VWA5A (HGNC Symbol)
Synonyms	BCSC-1, LOH11CR2A
Description	Von Willebrand factor A domain containing 5A (HGNC Symbol)
Entrez gene summary
Chromosome	11
Cytoband	q24.2
Chromosome location (bp)	124115362 - 124147721
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000110002 (version 83.38)
Entrez gene	4013
UniProt	O00534 (UniProt - Evidence at transcript level)
neXtProt	NX_O00534
Antibodypedia	VWA5A antibodies

PROTEIN BROWSER

VWA5A-001	VWA5A-004	VWA5A-005	VWA5A-006	VWA5A-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
VWA5A-001 ENSP00000407726 ENST00000456829	O00534 [Direct mapping] von Willebrand factor A domain-containing protein 5A A0A024R3H3 [Target identity:100%; Query identity:100%] Loss of heterozygosity, 11, chromosomal region 2, gene A, isoform CRA_b Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005634 [nucleus] GO:0005654 [nucleoplasm] Show all	786 aa 86.5 kDa	No	0
VWA5A-004 ENSP00000404683 ENST00000449321	O00534 [Direct mapping] von Willebrand factor A domain-containing protein 5A Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005634 [nucleus] GO:0005654 [nucleoplasm] Show all	415 aa 45.9 kDa	No	0
VWA5A-005 ENSP00000355070 ENST00000361352	O00534 [Direct mapping] von Willebrand factor A domain-containing protein 5A Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005634 [nucleus] GO:0005654 [nucleoplasm] Show all	415 aa 45.9 kDa	No	0
VWA5A-006 ENSP00000376501 ENST00000392744	B4DHS6 [Direct mapping] cDNA FLJ55206, highly similar to Loss of heterozygosity 11 chromosomal region 2 gene A protein; von Willebrand factor A domain-containing protein 5A Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005634 [nucleus] Show all	431 aa 47.7 kDa	No	0
VWA5A-201 ENSP00000376504 ENST00000392748	O00534 [Direct mapping] von Willebrand factor A domain-containing protein 5A A0A024R3H3 [Target identity:100%; Query identity:100%] Loss of heterozygosity, 11, chromosomal region 2, gene A, isoform CRA_b Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005634 [nucleus] GO:0005654 [nucleoplasm] Show all	786 aa 86.5 kDa	No	0

Contact

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.