Tissue expression of CHD4 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	36.0	TPM
GTEx:	28.3	RPKM
FANTOM5:	48.3	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Medium
Peripheral nerve:	High

Antibody staining	Antibody HPA012008
Fibroblasts	Medium
Peripheral nerve	High

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium

Antibody staining	Antibody HPA012008
Adipocytes	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	36.0

Female, age 80

Sample 1
TPM: 45.2

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 21.8

Female, age 57

Sample 3
TPM: 22.9

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 52.4

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 37.8

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	28.3

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 29.3

Samples: 350

Max RPKM: 49.4
Min RPKM: 12
Std RPKM: 5
Median RPKM: 29.2

GTEX-148VI-1726-SM-5S2W9

49.4

GTEX-131XF-2226-SM-5EQKG

48.7

GTEX-OOBJ-0226-SM-2YUMM

44.3

GTEX-ZTX8-1526-SM-5N9GI

43.4

GTEX-139YR-2426-SM-5J1OB

40.8

GTEX-Q2AI-1426-SM-2S1P5

40.4

GTEX-111CU-1826-SM-5GZYN

39.7

GTEX-PX3G-0226-SM-3NB2C

39.6

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 26.7

Samples: 227

Max RPKM: 45
Min RPKM: 14.3
Std RPKM: 5.2
Median RPKM: 26.4

GTEX-UPK5-1826-SM-3GAEB

45.0

GTEX-ZTX8-0726-SM-59HL9

42.5

GTEX-13O3P-0926-SM-5IFFI

41.9

GTEX-Y8E4-1226-SM-5IFIM

40.4

GTEX-13N11-1826-SM-5IJDS

39.5

GTEX-11WQK-1526-SM-5EGKN

38.5

GTEX-12696-1826-SM-5EGJS

38.4

GTEX-ZPU1-1226-SM-5HL71

36.9

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	48.3

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 48.3

FF:10010-101C1

65,65,76 years, mixed

48.3