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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:432.2TPM
GTEx:243.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Low
Neuronal cells:High
Neuropil:High
 

Antibody staining

Antibody CAB000063

 

Antibody CAB073539

 

Endothelial cells

Not detected   Not detected  

Glial cells

Not detected   Low  

Neuronal cells

High   High  

Neuropil

High   High  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

432.2

N/A Male, age 5
Sample 1
TPM: 449.5
overview Female, age 40
Sample 2
TPM: 277.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 569.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

243.9

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 231.6
Samples: 114

Max RPKM: 485.5
Min RPKM: 59.6
Std RPKM: 83.4
Median RPKM: 242
GTEX-11OF3-2926-SM-5HL78 485.5
GTEX-X585-3026-SM-46MWF 422.3
GTEX-13FXS-3126-SM-5J2NN 391.2
GTEX-11DXY-3226-SM-5GIDE 364.9
GTEX-WL46-2926-SM-3LK82 359.6
GTEX-13NYC-2826-SM-5K7WR 355.9
GTEX-14BMV-3026-SM-5S2PQ 341.8
GTEX-T5JC-2426-SM-3NMDB 337.4
GTEX-1313W-3126-SM-5LZUI 336.1
GTEX-11ZUS-2926-SM-5FQSL 328.3
GTEX-117XS-3026-SM-5N9CA 327.6
GTEX-12WSC-3026-SM-5GCNF 325.4
GTEX-YFC4-3126-SM-5PNV6 322.2
GTEX-13VXU-2926-SM-5LU5C 320.8
GTEX-145MH-3026-SM-5Q5DZ 319.3
GTEX-T6MN-2626-SM-32PMQ 316.9
GTEX-WWYW-3126-SM-3NB39 315.0
GTEX-PVOW-2526-SM-2XCF7 312.0
GTEX-13FHO-3026-SM-5J1O9 308.6
GTEX-WVLH-3026-SM-3MJG9 307.5
GTEX-Z93S-2926-SM-57WB9 304.6
GTEX-12ZZY-3026-SM-5GCOU 301.3
GTEX-13SLX-3126-SM-5S2Q5 300.3
GTEX-ZYFD-3026-SM-5E44C 297.2
GTEX-WHSE-3026-SM-3P5ZH 297.1
GTEX-WZTO-2926-SM-3NM9I 295.5
GTEX-13FLW-1426-SM-5K7YE 293.9
GTEX-11PRG-2926-SM-5987A 293.4
GTEX-13NYS-3126-SM-5KLYV 293.0
GTEX-XOTO-3026-SM-4B65M 290.9
GTEX-145MF-2726-SM-5O995 289.7
GTEX-ZUA1-3026-SM-59HJC 288.7
GTEX-TSE9-3026-SM-3DB76 288.3
GTEX-12ZZX-2926-SM-5GCOQ 287.1
GTEX-13OW6-3026-SM-5J2MI 286.3
GTEX-RNOR-2326-SM-2TF4I 286.0
GTEX-13OVH-3026-SM-5MR4N 284.6
GTEX-145LS-3126-SM-5Q5BY 283.1
GTEX-QVJO-1426-SM-2S1QY 281.6
GTEX-11NUK-2926-SM-5A5MD 278.7
GTEX-14ASI-3026-SM-5S2PN 278.4
GTEX-11ONC-2926-SM-5P9JM 272.5
GTEX-13O3Q-2926-SM-5KM45 270.5
GTEX-11DXW-1126-SM-5H12Q 270.2
GTEX-11GSO-2926-SM-5HL73 269.2
GTEX-ZAK1-3026-SM-5S2MJ 265.0
GTEX-YJ89-3026-SM-5IFJI 263.8
GTEX-131YS-3126-SM-5KLYT 261.9
GTEX-XLM4-3026-SM-4AT6L 261.9
GTEX-12126-1026-SM-5P9JJ 261.3
GTEX-UTHO-3026-SM-3GAFB 260.5
GTEX-132Q8-3026-SM-5PNVG 257.0
GTEX-T2IS-3026-SM-32QPM 254.6
GTEX-13OW8-2826-SM-5L3GC 251.0
GTEX-QMR6-1426-SM-32PLA 247.6
GTEX-1192X-3126-SM-5N9BY 246.1
GTEX-R55F-1326-SM-5S2V4 243.8
GTEX-111FC-3126-SM-5GZZ2 240.3
GTEX-X4XX-3026-SM-3NMB2 239.8
GTEX-13O3O-3126-SM-5KM3H 238.1
GTEX-144GL-3026-SM-5Q5CW 234.1
GTEX-13NYB-3026-SM-5IJD7 233.5
GTEX-Q2AG-2926-SM-2HMJ3 232.2
GTEX-145MG-3026-SM-5RQJA 224.6
GTEX-Y111-2726-SM-4TT3N 219.5
GTEX-13FHP-3026-SM-5IJBS 218.7
GTEX-1399T-3026-SM-5KLZC 218.6
GTEX-QDT8-2926-SM-32PKC 215.1
GTEX-ZVT3-3026-SM-5E43N 214.8
GTEX-11GS4-3126-SM-5A5LH 213.0
GTEX-11OC5-0726-SM-5P9JK 212.4
GTEX-Y8DK-0826-SM-4TT3T 210.7
GTEX-NPJ8-1526-SM-2D7VU 209.6
GTEX-12WSH-3026-SM-5CVNI 203.0
GTEX-1128S-2726-SM-5H12C 200.2
GTEX-QVUS-2826-SM-3GADB 186.9
GTEX-ZAJG-3126-SM-5HL9J 183.9
GTEX-14A5I-2926-SM-5Q5CQ 181.3
GTEX-12ZZW-2926-SM-5LZUP 181.0
GTEX-12ZZZ-3026-SM-5BC67 176.5
GTEX-1117F-3226-SM-5N9CT 176.1
GTEX-RU72-3026-SM-5SI7Y 169.2
GTEX-13X6J-3026-SM-5Q5CU 168.8
GTEX-11WQK-3026-SM-5EQL6 168.0
GTEX-13QIC-2926-SM-5J2NF 167.9
GTEX-NPJ7-2726-SM-2I3FT 167.9
GTEX-13PL6-3126-SM-5LUAR 167.6
GTEX-13S7M-3126-SM-5RQJQ 152.1
GTEX-11EMC-3226-SM-5EGKW 150.1
GTEX-OXRN-2426-SM-2I5EQ 149.7
GTEX-11EI6-3026-SM-5GZZO 147.0
GTEX-11O72-2926-SM-5BC4V 146.6
GTEX-13X6K-2926-SM-5Q5D5 146.0
GTEX-13PVQ-3026-SM-5SI93 137.6
GTEX-ZE7O-3126-SM-5HL5X 134.9
GTEX-13G51-3026-SM-5IJB8 134.8
GTEX-13JUV-2926-SM-5LZX7 127.9
GTEX-131XW-3126-SM-5LZUC 123.0
GTEX-13JVG-3126-SM-5L3FH 122.5
GTEX-ZZPT-3026-SM-5GZXH 121.2
GTEX-N7MT-1126-SM-5SI7V 121.0
GTEX-12WSD-3126-SM-5HL7P 119.3
GTEX-13OVJ-2826-SM-5L3GW 119.1
GTEX-144FL-3026-SM-5O99C 118.0
GTEX-147GR-3026-SM-5S2ML 115.8
GTEX-11NV4-2126-SM-5N9DS 112.0
GTEX-139T8-1026-SM-5J2MC 105.4
GTEX-13OW7-3026-SM-5L3GY 104.9
GTEX-11GSP-3226-SM-5986O 95.5
GTEX-11TTK-2926-SM-5PNYP 90.0
GTEX-PWO3-0926-SM-2I5EY 82.0
GTEX-13IVO-2926-SM-5L3CZ 72.6
GTEX-1445S-3026-SM-5O9BR 67.5
GTEX-12WSA-2926-SM-5EQ4D 59.6
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 256.9
Samples: 108

Max RPKM: 523.7
Min RPKM: 50.8
Std RPKM: 117
Median RPKM: 275.8
GTEX-X585-0011-R10A-SM-46MUY 523.7
GTEX-145MH-0011-R10b-SM-5PNUK 444.4
GTEX-12WSE-0011-R10b-SM-5P9JV 443.4
GTEX-T6MN-0011-R10A-SM-32QP7 436.7
GTEX-131XH-0011-R10a-SM-5EGLJ 417.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 416.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 416.3
GTEX-1313W-0011-R10b-SM-5DUXA 412.6
GTEX-WZTO-0011-R10B-SM-4E3KB 411.3
GTEX-145MG-0011-R10a-SM-5PNWG 408.2
GTEX-NL3H-0011-R10A-SM-2I3E9 402.3
GTEX-13NYS-0011-R10a-SM-5MR4S 400.8
GTEX-WL46-0011-R10A-SM-3MJFQ 398.7
GTEX-12WSF-0011-R10a-SM-5LZVH 396.1
GTEX-13SLX-0011-R10a-SM-5P9HV 394.0
GTEX-13O3Q-0011-R10b-SM-5KM39 391.9
GTEX-WVLH-0011-R10A-SM-3MJFM 389.6
GTEX-13X6K-0011-R10a-SM-5P9JR 384.8
GTEX-12WSC-0011-R10a-SM-5GU57 383.1
GTEX-S7SE-0011-R10A-SM-2XCDF 381.5
GTEX-13X6J-0011-R10b-SM-5PNWA 366.1
GTEX-13N1W-0011-R10b-SM-5MR4H 361.6
GTEX-131YS-0011-R10b-SM-5EQ5N 360.1
GTEX-Q2AG-0011-R10A-SM-2HMLA 351.6
GTEX-WWYW-0011-R10A-SM-3NB35 349.3
GTEX-14BIN-0011-R10a-SM-5S2UA 345.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 344.9
GTEX-N7MS-0011-R10A-SM-2HMJK 344.2
GTEX-T5JC-0011-R10A-SM-32PM2 342.3
GTEX-YFC4-0011-R10a-SM-4SOK5 340.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 339.2
GTEX-12ZZY-0011-R10b-SM-5HL7W 335.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 333.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 333.7
GTEX-XLM4-0011-R10A-SM-4AT5P 332.3
GTEX-13OW7-0011-R10a-SM-5L3H3 331.8
GTEX-13FHO-0011-R10b-SM-5J2MM 328.8
GTEX-11H98-0011-R10b-SM-5NQ98 326.0
GTEX-13CZV-0011-R10b-SM-5LZYD 324.3
GTEX-13QIC-0011-R10a-SM-5O9C7 311.5
GTEX-YJ89-0011-R10a-SM-4SOK9 308.7
GTEX-13FXS-0011-R10a-SM-5J2MA 307.7
GTEX-13S7M-0011-R10b-SM-5PNZB 305.1
GTEX-147GR-0011-R10b-SM-5S2UM 304.5
GTEX-145LS-0011-R10a-SM-5PNUQ 304.2
GTEX-13FLW-0011-R10b-SM-5LZZF 300.8
GTEX-12WSM-0011-R10a-SM-5DUWV 300.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC 295.9
GTEX-ZF28-0011-R10a-SM-4WWEH 293.8
GTEX-13NYB-0011-R10a-SM-5KM43 289.0
GTEX-NPJ7-0011-R10A-SM-2I3E5 287.3
GTEX-ZVZQ-0011-R10b-SM-51MRT 282.1
GTEX-X4XX-0011-R10B-SM-46MWO 281.6
GTEX-13OW6-0011-R10a-SM-5L3HE 276.7
GTEX-NPJ8-0011-R10A-SM-2YUMO 274.9
GTEX-X4EP-0011-R10B-SM-4QASJ 272.8
GTEX-13OVL-0011-R10a-SM-5L3GS 272.3
GTEX-QDT8-0011-R10A-SM-32PKG 267.6
GTEX-12WSH-0011-R10a-SM-5LZUS 264.3
GTEX-QMR6-0011-R10A-SM-32PKO 263.2
GTEX-N7MT-0011-R10A-SM-2I3E1 261.8
GTEX-14BIL-0011-R10a-SM-5SI75 257.6
GTEX-13O3O-0011-R10a-SM-5LUA9 256.3
GTEX-Z93S-0011-R10a-SM-4RGNM 254.6
GTEX-13X6I-0011-R10a-SM-5PNWI 247.4
GTEX-13G51-0011-R10b-SM-5LZYF 230.8
GTEX-ZUA1-0011-R10a-SM-51MT6 223.8
GTEX-ZAB4-0011-R10a-SM-4SOKH 219.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 214.9
GTEX-QVUS-0011-R10A-SM-3GIK3 213.1
GTEX-13QJC-0011-R10a-SM-5SI63 208.5
GTEX-TSE9-0011-R10A-SM-3DB7O 201.9
GTEX-13OW8-0011-R10a-SM-5L3H6 198.8
GTEX-ZVT3-0011-R10b-SM-57WB6 187.2
GTEX-147F4-0011-R10b-SM-5S2WC 186.6
GTEX-13JUV-0011-R10b-SM-5LZXR 180.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 180.1
GTEX-P44H-0011-R10A-SM-2XCEK 179.1
GTEX-12126-0011-R10b-SM-5BC6T 175.4
GTEX-145LU-0011-R10a-SM-5PNWJ 161.0
GTEX-RVPU-0011-R10A-SM-2XCAH 158.7
GTEX-OXRN-0011-R10A-SM-2I5GC 154.2
GTEX-11ZUS-0011-R10b-SM-5BC79 141.8
GTEX-13FTZ-0011-R10b-SM-5KLZS 139.4
GTEX-13N2G-0011-R10a-SM-5MR34 128.5
GTEX-11WQK-0011-R10a-SM-5BC6R 125.0
GTEX-11WQC-0011-R10a-SM-57WCT 117.8
GTEX-13SLW-0011-R10a-SM-5S2UI 117.8
GTEX-NL4W-0011-R10A-SM-2I3DY 115.9
GTEX-X261-0011-R10B-SM-4E3JT 115.4
GTEX-ZXG5-0011-R10a-SM-57WDD 114.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 107.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 95.7
GTEX-13NZA-0011-R10b-SM-5KM54 95.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 87.0
GTEX-XMD1-0011-R10A-SM-4AT4A 85.6
GTEX-139TS-0011-R10a-SM-5K7TU 82.5
GTEX-12WSD-0011-R10b-SM-5GU79 81.8
GTEX-ZE7O-0011-R10a-SM-57WAZ 78.0
GTEX-OXRO-0011-R10A-SM-2I5EH 76.2
GTEX-13JVG-0011-R10b-SM-5KM2P 73.5
GTEX-12WSA-0011-R10b-SM-5P9ET 65.2
GTEX-1477Z-0011-R10b-SM-5S2RF 62.1
GTEX-13IVO-0011-R10a-SM-5LZY3 61.2
GTEX-14753-0011-R10b-SM-5S2WE 59.0
GTEX-131XW-0011-R10a-SM-5DUVA 55.2
GTEX-ZV68-0011-R10a-SM-51MT7 51.2
GTEX-1445S-0011-R10a-SM-5PNWB 50.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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