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PTPN6

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:16.4TPM
GTEx:8.9RPKM
FANTOM5:17.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Peripheral nerve:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
 
 
 

Antibody staining

Antibody HPA001466

  

Antibody CAB004572

  

Antibody CAB072845

  

Adipocytes

 High   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected   Not detected  
        
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA001466

  

Antibody CAB004572

  

Antibody CAB072845

  

Adipocytes

 High   Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

16.4
N/A Female, age 80
Sample 1
TPM: 3.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 3.4
N/A Female, age 57
Sample 3
TPM: 2.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 43.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 29.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

8.9

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 9.0
Samples: 350

Max RPKM: 38.3
Min RPKM: 1.3
Std RPKM: 5.1
Median RPKM: 8
GTEX-111VG-2326-SM-5N9BK 38.3
GTEX-QDT8-0226-SM-32PL4 33.4
GTEX-13JVG-0226-SM-5J1MW 32.9
GTEX-11GSO-2326-SM-5A5LX 32.1
GTEX-XMD2-0226-SM-4WWEE 27.8
GTEX-13NZA-0126-SM-5K7UH 26.0
GTEX-11UD1-0226-SM-5EQKL 25.8
GTEX-13FHO-0326-SM-5IJBH 22.9
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 8.8
Samples: 227

Max RPKM: 36
Min RPKM: 1.7
Std RPKM: 4.9
Median RPKM: 8
GTEX-14A6H-1026-SM-5SIAZ 36.0
GTEX-ZVZP-1126-SM-5GICU 33.6
GTEX-Y9LG-1226-SM-4VBQA 30.8
GTEX-13N11-1826-SM-5IJDS 24.3
GTEX-13X6H-1726-SM-5Q5EH 22.7
GTEX-ZZPU-0326-SM-5N9BJ 22.2
GTEX-XBED-1326-SM-4AT4F 19.2
GTEX-11EM3-1126-SM-5A5KM 19.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

17.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 17.0
FF:10010-101C1 65,65,76 years, mixed 17.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.