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PTPN6
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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:36.6TPM
GTEx:40.6RPKM
FANTOM5:29.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA001466

 

Antibody CAB004572

 

Antibody CAB072845

 

Glandular cells

Low   Not detected   Not detected  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

36.6

overview Male, age 65
Sample 1
TPM: 33.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 39.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 44.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 28.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

40.6

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 40.6
Samples: 88

Max RPKM: 161.2
Min RPKM: 3.8
Std RPKM: 32.1
Median RPKM: 27.3
GTEX-11VI4-1626-SM-5EQKO 161.2
GTEX-X15G-1426-SM-4PQZK 155.8
GTEX-11NSD-1726-SM-5N9C3 124.9
GTEX-UPK5-2026-SM-4JBIM 103.2
GTEX-WFJO-0926-SM-4LVM2 100.4
GTEX-13FH7-1226-SM-5IJFK 94.3
GTEX-Z9EW-0926-SM-5CVMM 89.2
GTEX-WRHK-1026-SM-4MVOD 87.3
GTEX-ZEX8-1826-SM-57WBH 87.1
GTEX-11XUK-1426-SM-5EQMG 86.6
GTEX-WH7G-1626-SM-4LVMY 86.6
GTEX-11P82-0826-SM-5P9GU 85.5
GTEX-1399U-2126-SM-5IFEZ 77.9
GTEX-ZC5H-2326-SM-4WAYT 75.6
GTEX-ZVP2-1726-SM-5GU5P 74.2
GTEX-VUSG-1726-SM-4KKZL 68.1
GTEX-ZP4G-1626-SM-57WGD 66.7
GTEX-13O61-1326-SM-5KM31 61.8
GTEX-1399S-2026-SM-5KM4B 61.0
GTEX-14E6E-1626-SM-5RQI7 58.7
GTEX-131XG-1726-SM-5LZUR 54.3
GTEX-145ME-0926-SM-5O9AR 54.2
GTEX-ZLFU-1526-SM-4WWBT 53.3
GTEX-12BJ1-1926-SM-5HL9Z 51.1
GTEX-11DXZ-1326-SM-5H11X 51.0
GTEX-XAJ8-0526-SM-47JYK 50.8
GTEX-11P7K-1626-SM-5GU63 49.8
GTEX-11DXX-1626-SM-5H11H 49.7
GTEX-ZZ64-0526-SM-5GZXM 44.7
GTEX-VJYA-0926-SM-4KL1N 44.5
GTEX-WEY5-1526-SM-4LMJF 40.4
GTEX-13QBU-1926-SM-5IJEW 38.8
GTEX-ZVT2-2126-SM-5NQ93 38.0
GTEX-ZQG8-2526-SM-57WEQ 37.3
GTEX-XGQ4-1326-SM-4GIDU 36.3
GTEX-11EQ9-1326-SM-5985X 36.3
GTEX-11I78-1126-SM-5A5K5 35.3
GTEX-ZYWO-1526-SM-5SIAL 34.3
GTEX-139T6-1026-SM-5IJGC 33.0
GTEX-148VJ-2226-SM-5NQ9M 32.4
GTEX-13CF3-1226-SM-5LZXN 29.8
GTEX-13111-1426-SM-5DUW3 28.8
GTEX-X5EB-1626-SM-4E3IV 27.7
GTEX-1399R-2026-SM-5K7WN 27.3
GTEX-13RTK-0826-SM-5Q5C6 27.3
GTEX-Y5LM-1626-SM-4VDTB 26.7
GTEX-WQUQ-2426-SM-4MVNW 26.7
GTEX-133LE-1426-SM-5IFH1 26.1
GTEX-13113-1226-SM-5EGHT 25.8
GTEX-ZPIC-2326-SM-57WDW 25.4
GTEX-13FTW-2026-SM-5IJE2 24.7
GTEX-13D11-0726-SM-5LZZB 24.6
GTEX-ZA64-1226-SM-5HL7B 24.5
GTEX-131XF-1326-SM-5GCMQ 24.3
GTEX-ZYFG-2026-SM-5E43Y 22.2
GTEX-XXEK-1026-SM-4BRUW 22.1
GTEX-ZXES-1526-SM-5NQ95 21.8
GTEX-XBED-1426-SM-4AT4G 21.3
GTEX-ZLV1-1126-SM-4WWBW 21.2
GTEX-XUZC-1426-SM-4BRV3 21.2
GTEX-WFG8-1626-SM-4LVMB 21.1
GTEX-YB5E-1526-SM-5IFIE 20.8
GTEX-145LT-1026-SM-5LU9O 20.2
GTEX-13O21-1026-SM-5IJDU 19.8
GTEX-139YR-2226-SM-5IFFW 19.6
GTEX-ZVZP-1826-SM-5GZXB 18.8
GTEX-ZTX8-0526-SM-59HLD 18.5
GTEX-ZTPG-2626-SM-57WFX 18.4
GTEX-13PL7-2626-SM-5IFH4 18.2
GTEX-YF7O-1826-SM-5IFIU 18.1
GTEX-Y114-1426-SM-4TT6W 17.9
GTEX-14DAR-1426-SM-5RQIR 17.1
GTEX-1122O-1326-SM-5H11F 16.3
GTEX-YEC4-1726-SM-4W21E 16.2
GTEX-ZTSS-0926-SM-59865 15.4
GTEX-Y9LG-1626-SM-5IFHM 15.2
GTEX-WFG7-1726-SM-4LVME 14.3
GTEX-ZPCL-1726-SM-57WEO 12.2
GTEX-12WSK-1526-SM-5CVNO 12.1
GTEX-111YS-1426-SM-5GID8 11.8
GTEX-XMK1-1826-SM-4B66F 10.7
GTEX-Y3IK-1726-SM-4YCCR 10.5
GTEX-ZF2S-1726-SM-57WFT 9.7
GTEX-111CU-1326-SM-5NQ8L 7.4
GTEX-1192X-2526-SM-59868 5.5
GTEX-117YX-0326-SM-5GICL 4.9
GTEX-ZQUD-0926-SM-57WE3 3.9
GTEX-13OVI-1926-SM-5IJCG 3.8
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

29.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 29.9
FF:10024-101D6 15,40,85 years, mixed 29.9

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