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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:125.5TPM
GTEx:40.3RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Medium
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA050530

 

Antibody HPA054147

 

Endothelial cells

Not detected   Not detected  

Glial cells

Medium   Not detected  

Neuronal cells

High   Low  

Neuropil

High   Medium  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

125.5

N/A Male, age 5
Sample 1
TPM: 178.7
overview Female, age 40
Sample 2
TPM: 66.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 131.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

40.3

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 26.1
Samples: 114

Max RPKM: 65.6
Min RPKM: 5.6
Std RPKM: 11.4
Median RPKM: 25.8
GTEX-PVOW-2526-SM-2XCF7 65.6
GTEX-T2IS-3026-SM-32QPM 49.2
GTEX-WZTO-2926-SM-3NM9I 48.0
GTEX-TSE9-3026-SM-3DB76 47.4
GTEX-WVLH-3026-SM-3MJG9 45.4
GTEX-T5JC-2426-SM-3NMDB 44.0
GTEX-WL46-2926-SM-3LK82 43.8
GTEX-131YS-3126-SM-5KLYT 43.3
GTEX-11NUK-2926-SM-5A5MD 43.2
GTEX-WHSE-3026-SM-3P5ZH 43.0
GTEX-WWYW-3126-SM-3NB39 43.0
GTEX-145MH-3026-SM-5Q5DZ 42.1
GTEX-Y8DK-0826-SM-4TT3T 41.8
GTEX-14BMV-3026-SM-5S2PQ 41.4
GTEX-ZAK1-3026-SM-5S2MJ 41.4
GTEX-11ZUS-2926-SM-5FQSL 40.1
GTEX-11O72-2926-SM-5BC4V 39.3
GTEX-11DXY-3226-SM-5GIDE 38.9
GTEX-13PL6-3126-SM-5LUAR 38.0
GTEX-11PRG-2926-SM-5987A 37.7
GTEX-13NYC-2826-SM-5K7WR 37.7
GTEX-14ASI-3026-SM-5S2PN 37.5
GTEX-QMR6-1426-SM-32PLA 37.5
GTEX-RNOR-2326-SM-2TF4I 37.4
GTEX-YFC4-3126-SM-5PNV6 37.2
GTEX-12ZZX-2926-SM-5GCOQ 36.8
GTEX-1313W-3126-SM-5LZUI 34.4
GTEX-ZUA1-3026-SM-59HJC 34.4
GTEX-13O3O-3126-SM-5KM3H 34.3
GTEX-T6MN-2626-SM-32PMQ 33.6
GTEX-117XS-3026-SM-5N9CA 33.2
GTEX-UTHO-3026-SM-3GAFB 32.2
GTEX-12ZZZ-3026-SM-5BC67 31.8
GTEX-145MG-3026-SM-5RQJA 31.6
GTEX-13OVH-3026-SM-5MR4N 31.1
GTEX-12WSH-3026-SM-5CVNI 30.9
GTEX-Z93S-2926-SM-57WB9 30.9
GTEX-12126-1026-SM-5P9JJ 30.7
GTEX-13SLX-3126-SM-5S2Q5 30.6
GTEX-145LS-3126-SM-5Q5BY 30.3
GTEX-13OW6-3026-SM-5J2MI 29.7
GTEX-ZYFD-3026-SM-5E44C 29.6
GTEX-X4XX-3026-SM-3NMB2 29.5
GTEX-12WSC-3026-SM-5GCNF 29.0
GTEX-13FXS-3126-SM-5J2NN 28.7
GTEX-13FHO-3026-SM-5J1O9 28.4
GTEX-13FLW-1426-SM-5K7YE 28.0
GTEX-XOTO-3026-SM-4B65M 27.6
GTEX-144GL-3026-SM-5Q5CW 27.4
GTEX-ZVT3-3026-SM-5E43N 27.2
GTEX-13O3Q-2926-SM-5KM45 27.0
GTEX-XLM4-3026-SM-4AT6L 26.9
GTEX-1399T-3026-SM-5KLZC 26.8
GTEX-13VXU-2926-SM-5LU5C 26.8
GTEX-13QIC-2926-SM-5J2NF 26.6
GTEX-RU72-3026-SM-5SI7Y 26.4
GTEX-13X6J-3026-SM-5Q5CU 26.0
GTEX-111FC-3126-SM-5GZZ2 25.6
GTEX-11GSO-2926-SM-5HL73 25.4
GTEX-14A5I-2926-SM-5Q5CQ 25.1
GTEX-1128S-2726-SM-5H12C 24.9
GTEX-OXRN-2426-SM-2I5EQ 24.5
GTEX-13FHP-3026-SM-5IJBS 24.4
GTEX-X585-3026-SM-46MWF 23.6
GTEX-R55F-1326-SM-5S2V4 23.3
GTEX-YJ89-3026-SM-5IFJI 21.7
GTEX-Y111-2726-SM-4TT3N 21.6
GTEX-11DXW-1126-SM-5H12Q 21.1
GTEX-13NYB-3026-SM-5IJD7 20.7
GTEX-13NYS-3126-SM-5KLYV 20.4
GTEX-ZE7O-3126-SM-5HL5X 20.4
GTEX-145MF-2726-SM-5O995 20.2
GTEX-11WQK-3026-SM-5EQL6 20.1
GTEX-11ONC-2926-SM-5P9JM 19.8
GTEX-QDT8-2926-SM-32PKC 19.8
GTEX-13JVG-3126-SM-5L3FH 19.6
GTEX-12ZZY-3026-SM-5GCOU 19.0
GTEX-Q2AG-2926-SM-2HMJ3 19.0
GTEX-131XW-3126-SM-5LZUC 18.9
GTEX-QVJO-1426-SM-2S1QY 18.9
GTEX-13X6K-2926-SM-5Q5D5 18.8
GTEX-13OW7-3026-SM-5L3GY 18.7
GTEX-132Q8-3026-SM-5PNVG 18.6
GTEX-11NV4-2126-SM-5N9DS 18.5
GTEX-11EMC-3226-SM-5EGKW 18.1
GTEX-13PVQ-3026-SM-5SI93 18.1
GTEX-ZAJG-3126-SM-5HL9J 18.1
GTEX-13OW8-2826-SM-5L3GC 17.7
GTEX-11OC5-0726-SM-5P9JK 17.1
GTEX-13S7M-3126-SM-5RQJQ 16.9
GTEX-13IVO-2926-SM-5L3CZ 16.6
GTEX-13OVJ-2826-SM-5L3GW 16.5
GTEX-11GS4-3126-SM-5A5LH 16.4
GTEX-11EI6-3026-SM-5GZZO 16.0
GTEX-12WSD-3126-SM-5HL7P 15.4
GTEX-12ZZW-2926-SM-5LZUP 14.8
GTEX-QVUS-2826-SM-3GADB 14.5
GTEX-1192X-3126-SM-5N9BY 14.4
GTEX-NPJ7-2726-SM-2I3FT 13.0
GTEX-NPJ8-1526-SM-2D7VU 11.9
GTEX-N7MT-1126-SM-5SI7V 11.7
GTEX-147GR-3026-SM-5S2ML 11.5
GTEX-11GSP-3226-SM-5986O 11.4
GTEX-ZZPT-3026-SM-5GZXH 10.6
GTEX-13JUV-2926-SM-5LZX7 10.4
GTEX-13G51-3026-SM-5IJB8 9.6
GTEX-139T8-1026-SM-5J2MC 9.4
GTEX-11TTK-2926-SM-5PNYP 8.9
GTEX-PWO3-0926-SM-2I5EY 8.2
GTEX-144FL-3026-SM-5O99C 8.0
GTEX-1117F-3226-SM-5N9CT 6.6
GTEX-1445S-3026-SM-5O9BR 6.5
GTEX-11OF3-2926-SM-5HL78 5.8
GTEX-12WSA-2926-SM-5EQ4D 5.6
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 55.3
Samples: 108

Max RPKM: 104.3
Min RPKM: 7.6
Std RPKM: 23
Median RPKM: 57.3
GTEX-WVLH-0011-R10A-SM-3MJFM 104.3
GTEX-WL46-0011-R10A-SM-3MJFQ 101.6
GTEX-T6MN-0011-R10A-SM-32QP7 100.3
GTEX-QDT8-0011-R10A-SM-32PKG 97.0
GTEX-12WSE-0011-R10b-SM-5P9JV 93.5
GTEX-WWYW-0011-R10A-SM-3NB35 90.1
GTEX-YFC4-0011-R10a-SM-4SOK5 86.0
GTEX-T5JC-0011-R10A-SM-32PM2 84.6
GTEX-S7SE-0011-R10A-SM-2XCDF 84.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 84.1
GTEX-145MH-0011-R10b-SM-5PNUK 83.9
GTEX-WZTO-0011-R10B-SM-4E3KB 83.9
GTEX-131XH-0011-R10a-SM-5EGLJ 82.9
GTEX-145MG-0011-R10a-SM-5PNWG 82.1
GTEX-NL3H-0011-R10A-SM-2I3E9 81.6
GTEX-1313W-0011-R10b-SM-5DUXA 81.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 81.1
GTEX-Q2AG-0011-R10A-SM-2HMLA 80.4
GTEX-Y8DK-0011-R10A-SM-4SOK1 79.6
GTEX-13S7M-0011-R10b-SM-5PNZB 78.6
GTEX-131YS-0011-R10b-SM-5EQ5N 75.6
GTEX-12WSH-0011-R10a-SM-5LZUS 75.4
GTEX-13QIC-0011-R10a-SM-5O9C7 72.9
GTEX-13O3Q-0011-R10b-SM-5KM39 72.8
GTEX-13N1W-0011-R10b-SM-5MR4H 71.9
GTEX-12WSM-0011-R10a-SM-5DUWV 71.6
GTEX-14BIN-0011-R10a-SM-5S2UA 71.3
GTEX-QMR6-0011-R10A-SM-32PKO 71.1
GTEX-13X6J-0011-R10b-SM-5PNWA 70.7
GTEX-YJ89-0011-R10a-SM-4SOK9 70.4
GTEX-X585-0011-R10A-SM-46MUY 70.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC 69.3
GTEX-13FHO-0011-R10b-SM-5J2MM 68.8
GTEX-N7MS-0011-R10A-SM-2HMJK 68.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 68.0
GTEX-X4XX-0011-R10B-SM-46MWO 68.0
GTEX-QVUS-0011-R10A-SM-3GIK3 66.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 66.2
GTEX-12WSC-0011-R10a-SM-5GU57 65.8
GTEX-12WSF-0011-R10a-SM-5LZVH 65.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 65.3
GTEX-12126-0011-R10b-SM-5BC6T 64.6
GTEX-145LS-0011-R10a-SM-5PNUQ 63.1
GTEX-13CZV-0011-R10b-SM-5LZYD 62.7
GTEX-13X6K-0011-R10a-SM-5P9JR 60.9
GTEX-TSE9-0011-R10A-SM-3DB7O 60.2
GTEX-OXRN-0011-R10A-SM-2I5GC 59.7
GTEX-14BIL-0011-R10a-SM-5SI75 59.6
GTEX-P44H-0011-R10A-SM-2XCEK 58.8
GTEX-13OVL-0011-R10a-SM-5L3GS 58.2
GTEX-Z93S-0011-R10a-SM-4RGNM 58.2
GTEX-13O3O-0011-R10a-SM-5LUA9 58.0
GTEX-147GR-0011-R10b-SM-5S2UM 57.6
GTEX-13FLW-0011-R10b-SM-5LZZF 57.5
GTEX-ZF28-0011-R10a-SM-4WWEH 57.2
GTEX-13X6I-0011-R10a-SM-5PNWI 57.1
GTEX-11H98-0011-R10b-SM-5NQ98 57.0
GTEX-13NYB-0011-R10a-SM-5KM43 57.0
GTEX-QVJO-0011-R10A-SM-2S1QJ 56.9
GTEX-13SLX-0011-R10a-SM-5P9HV 55.9
GTEX-13G51-0011-R10b-SM-5LZYF 54.8
GTEX-13FXS-0011-R10a-SM-5J2MA 54.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 54.1
GTEX-ZDXO-0011-R10a-SM-4WWD8 52.3
GTEX-ZUA1-0011-R10a-SM-51MT6 52.3
GTEX-XLM4-0011-R10A-SM-4AT5P 52.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 51.4
GTEX-N7MT-0011-R10A-SM-2I3E1 51.0
GTEX-13OW7-0011-R10a-SM-5L3H3 49.5
GTEX-145LU-0011-R10a-SM-5PNWJ 49.2
GTEX-13OW6-0011-R10a-SM-5L3HE 48.6
GTEX-13QJC-0011-R10a-SM-5SI63 48.0
GTEX-ZVT3-0011-R10b-SM-57WB6 48.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 46.6
GTEX-13FTZ-0011-R10b-SM-5KLZS 45.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 44.4
GTEX-11ZUS-0011-R10b-SM-5BC79 43.6
GTEX-147F4-0011-R10b-SM-5S2WC 43.2
GTEX-X4EP-0011-R10B-SM-4QASJ 43.2
GTEX-139TS-0011-R10a-SM-5K7TU 41.1
GTEX-13OW8-0011-R10a-SM-5L3H6 40.1
GTEX-NPJ8-0011-R10A-SM-2YUMO 39.2
GTEX-11WQK-0011-R10a-SM-5BC6R 37.6
GTEX-RVPU-0011-R10A-SM-2XCAH 35.9
GTEX-13NZA-0011-R10b-SM-5KM54 34.3
GTEX-X261-0011-R10B-SM-4E3JT 32.5
GTEX-12WSD-0011-R10b-SM-5GU79 32.2
GTEX-11WQC-0011-R10a-SM-57WCT 31.0
GTEX-13N2G-0011-R10a-SM-5MR34 30.9
GTEX-13NYS-0011-R10a-SM-5MR4S 29.4
GTEX-ZXG5-0011-R10a-SM-57WDD 29.4
GTEX-13JUV-0011-R10b-SM-5LZXR 28.0
GTEX-OXRO-0011-R10A-SM-2I5EH 27.8
GTEX-13SLW-0011-R10a-SM-5S2UI 27.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 26.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 25.6
GTEX-11GSP-0011-R10a-SM-5NQ7J 19.1
GTEX-13IVO-0011-R10a-SM-5LZY3 18.7
GTEX-NL4W-0011-R10A-SM-2I3DY 18.1
GTEX-14753-0011-R10b-SM-5S2WE 17.4
GTEX-13JVG-0011-R10b-SM-5KM2P 15.2
GTEX-ZE7O-0011-R10a-SM-57WAZ 14.2
GTEX-1477Z-0011-R10b-SM-5S2RF 13.7
GTEX-XMD1-0011-R10A-SM-4AT4A 13.6
GTEX-12WSA-0011-R10b-SM-5P9ET 11.8
GTEX-ZV68-0011-R10a-SM-51MT7 9.9
GTEX-131XW-0011-R10a-SM-5DUVA 9.6
GTEX-1445S-0011-R10a-SM-5PNWB 7.6
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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