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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:39.2RPKM
FANTOM5:116.7Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:High
 

Antibody staining

Antibody HPA050530

 

Antibody HPA054147

 

Glial cells

Low   Not detected  

Neuronal cells

High   Medium  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

39.2

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 39.2
Samples: 94

Max RPKM: 144.4
Min RPKM: 1.6
Std RPKM: 29.7
Median RPKM: 35.5
GTEX-144GL-0011-R1a-SM-5PNZ5 144.4
GTEX-12WSE-0011-R1b-SM-5GU4V 112.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 108.0
GTEX-13O3O-0011-R1b-SM-5KM2K 104.0
GTEX-PVOW-0011-R1A-SM-32PL6 101.1
GTEX-131XH-0011-R1a-SM-5DUWA 97.6
GTEX-YFC4-0011-R1a-SM-4V6EH 89.2
GTEX-N7MS-0011-R1a-SM-2HMJG 86.7
GTEX-139TT-0011-R1a-SM-5LZVD 79.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 78.7
GTEX-T6MN-0011-R1A-SM-32QOY 77.3
GTEX-P44H-0011-R1A-SM-3NM8J 75.2
GTEX-WWYW-0011-R1A-SM-3TW8G 73.7
GTEX-14ASI-0011-R1b-SM-5S2TY 72.2
GTEX-X585-0011-R1B-SM-46MVE 68.7
GTEX-13FXS-0011-R1a-SM-5K7U6 67.6
GTEX-13X6I-0011-R1b-SM-5PNZC 67.0
GTEX-13JUV-0011-R1a-SM-5LZY4 66.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 64.1
GTEX-12WSF-0011-R1a-SM-5DUVI 59.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 59.3
GTEX-12WSH-0011-R1a-SM-5GU5V 56.3
GTEX-RNOR-0011-R1A-SM-5SI8F 55.4
GTEX-N7MT-0011-R1a-SM-5SI7S 54.8
GTEX-13FLW-0011-R1b-SM-5LZX2 54.0
GTEX-145MH-0011-R1b-SM-5PNWY 53.0
GTEX-12WSD-0011-R1b-SM-5LZVY 51.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50.3
GTEX-WL46-0011-R1A-SM-3LK6M 50.1
GTEX-13N2G-0011-R1b-SM-5MR3G 48.8
GTEX-13G51-0011-R1a-SM-5LZYR 47.6
GTEX-12WSM-0011-R1a-SM-5LZW6 47.4
GTEX-13112-0011-R1b-SM-5HL7K 47.3
GTEX-S7SE-0011-R1A-SM-2XCDE 46.9
GTEX-WZTO-0011-R1B-SM-3NMAR 46.8
GTEX-13OW7-0011-R1b-SM-5L3HF 45.3
GTEX-T5JC-0011-R1A-SM-32PM6 45.2
GTEX-13N1W-0011-R1b-SM-5MR4T 45.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 44.8
GTEX-NPJ7-0011-R1a-SM-3GACT 43.6
GTEX-R55E-0011-R1A-SM-2TC6N 42.6
GTEX-XOTO-0011-R1B-SM-4B65C 42.1
GTEX-QDT8-0011-R1A-SM-32PKS 40.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 40.3
GTEX-13NYB-0011-R1b-SM-5KM4F 37.7
GTEX-13OW6-0011-R1a-SM-5L3HQ 37.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 35.7
GTEX-TSE9-0011-R1A-SM-3DB7E 35.2
GTEX-139T8-0011-R1a-SM-5HL75 33.5
GTEX-QVJO-0011-R1A-SM-2S1QI 32.9
GTEX-WVLH-0011-R1A-SM-4MVOK 26.3
GTEX-145LU-0011-R1a-SM-5Q5CE 25.4
GTEX-QMR6-0011-R1A-SM-32PKW 25.2
GTEX-X4XX-0011-R1B-SM-3P622 25.0
GTEX-13SLW-0011-R1a-SM-5S2W7 24.6
GTEX-13PDP-0011-R1a-SM-5PNX5 24.1
GTEX-11ONC-0011-R1a-SM-57WD4 23.9
GTEX-NL3H-0011-R1a-SM-48TDJ 23.8
GTEX-YJ89-0011-R1a-SM-4RGLS 23.1
GTEX-QVUS-0011-R1A-SM-3GAD2 22.5
GTEX-13S7M-0011-R1b-SM-5PNZE 22.5
GTEX-1399T-0011-R1b-SM-5DUWN 22.4
GTEX-145LS-0011-R1b-SM-5PNUP 21.4
GTEX-131YS-0011-R1a-SM-5DUXC 20.9
GTEX-11UD1-0011-R1b-SM-5BC7D 20.6
GTEX-ZUA1-0011-R1a-SM-4YCE2 20.1
GTEX-NPJ8-0011-R1a-SM-33HCB 19.9
GTEX-ZF28-0011-R1a-SM-4WWD1 16.8
GTEX-PWO3-0011-R1A-SM-2I5EW 15.6
GTEX-UTHO-0011-R1A-SM-3GIJO 15.5
GTEX-132Q8-0011-R1a-SM-5EGLK 14.7
GTEX-13FHO-0011-R1b-SM-5KLZG 13.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 13.6
GTEX-ZVZQ-0011-R1a-SM-57WBU 11.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 11.5
GTEX-13NYS-0011-R1b-SM-5MR55 11.1
GTEX-13CF2-0011-R1a-SM-5LZY1 10.9
GTEX-13FTY-0011-R1a-SM-5LZXE 10.7
GTEX-11GSO-0011-R1b-SM-57WD3 9.6
GTEX-13FHP-0011-R1b-SM-5K7XL 9.6
GTEX-ZE7O-0011-R1a-SM-57WDM 7.8
GTEX-13OVL-0011-R1a-SM-5L3H5 7.5
GTEX-144GO-0011-R1a-SM-5PNWO 7.0
GTEX-1212Z-0011-R1b-SM-5BC72 6.2
GTEX-13OW8-0011-R1a-SM-5L3HI 5.0
GTEX-13OW5-0011-R1b-SM-5L3GE 4.9
GTEX-13QJC-0011-R1b-SM-5S2UU 4.5
GTEX-12WSB-0011-R1b-SM-5P9EY 4.5
GTEX-11ZTS-0011-R1a-SM-5BC71 4.0
GTEX-XMD1-0011-R1A-SM-4AT4C 3.6
GTEX-13JVG-0011-R1a-SM-5KM32 3.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 3.4
GTEX-13NZA-0011-R1b-SM-5LUAF 1.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 1.6
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

116.7

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 116.7
FF:10374-105G5 89 years, female 139.4
FF:10169-103B7 60 years, female 127.7
FF:10153-102I9 76 years, female 83.0

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