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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:1106.8TPM
GTEx:966.8RPKM
FANTOM5:578.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA006124

 

Glandular cells

High  
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

1106.8

overview Male, age 65
Sample 1
TPM: 1075.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 1072.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 1191.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 1087.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

966.8

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 966.8
Samples: 88

Max RPKM: 1866.7
Min RPKM: 326.4
Std RPKM: 344.1
Median RPKM: 921.4
GTEX-148VJ-2226-SM-5NQ9M 1866.7
GTEX-Y5LM-1626-SM-4VDTB 1759.3
GTEX-11VI4-1626-SM-5EQKO 1749.8
GTEX-WRHK-1026-SM-4MVOD 1723.3
GTEX-1399U-2126-SM-5IFEZ 1663.7
GTEX-VUSG-1726-SM-4KKZL 1626.1
GTEX-11P82-0826-SM-5P9GU 1567.5
GTEX-UPK5-2026-SM-4JBIM 1469.0
GTEX-131XG-1726-SM-5LZUR 1408.1
GTEX-WH7G-1626-SM-4LVMY 1402.4
GTEX-13FH7-1226-SM-5IJFK 1383.9
GTEX-X15G-1426-SM-4PQZK 1376.1
GTEX-11XUK-1426-SM-5EQMG 1330.0
GTEX-11NSD-1726-SM-5N9C3 1302.9
GTEX-ZLFU-1526-SM-4WWBT 1293.7
GTEX-13RTK-0826-SM-5Q5C6 1292.8
GTEX-ZC5H-2326-SM-4WAYT 1281.4
GTEX-WFJO-0926-SM-4LVM2 1255.0
GTEX-13O61-1326-SM-5KM31 1245.1
GTEX-ZP4G-1626-SM-57WGD 1218.1
GTEX-13QBU-1926-SM-5IJEW 1216.7
GTEX-145ME-0926-SM-5O9AR 1206.9
GTEX-1192X-2526-SM-59868 1167.9
GTEX-ZTPG-2626-SM-57WFX 1155.4
GTEX-ZEX8-1826-SM-57WBH 1146.9
GTEX-ZVP2-1726-SM-5GU5P 1134.2
GTEX-14E6E-1626-SM-5RQI7 1115.9
GTEX-VJYA-0926-SM-4KL1N 1104.8
GTEX-WFG8-1626-SM-4LVMB 1096.9
GTEX-Z9EW-0926-SM-5CVMM 1082.9
GTEX-Y3IK-1726-SM-4YCCR 1065.1
GTEX-ZA64-1226-SM-5HL7B 1063.4
GTEX-12BJ1-1926-SM-5HL9Z 1061.5
GTEX-139T6-1026-SM-5IJGC 1061.0
GTEX-ZYWO-1526-SM-5SIAL 1042.9
GTEX-WEY5-1526-SM-4LMJF 1034.8
GTEX-139YR-2226-SM-5IFFW 1014.0
GTEX-XGQ4-1326-SM-4GIDU 1006.1
GTEX-13111-1426-SM-5DUW3 989.1
GTEX-XMK1-1826-SM-4B66F 962.8
GTEX-ZQG8-2526-SM-57WEQ 955.4
GTEX-ZVT2-2126-SM-5NQ93 955.1
GTEX-117YX-0326-SM-5GICL 934.6
GTEX-ZPIC-2326-SM-57WDW 925.0
GTEX-X5EB-1626-SM-4E3IV 917.7
GTEX-ZZ64-0526-SM-5GZXM 909.7
GTEX-13113-1226-SM-5EGHT 892.5
GTEX-XAJ8-0526-SM-47JYK 890.7
GTEX-13OVI-1926-SM-5IJCG 853.9
GTEX-12WSK-1526-SM-5CVNO 849.3
GTEX-131XF-1326-SM-5GCMQ 843.0
GTEX-ZXES-1526-SM-5NQ95 828.7
GTEX-111CU-1326-SM-5NQ8L 817.5
GTEX-WFG7-1726-SM-4LVME 816.8
GTEX-ZYFG-2026-SM-5E43Y 814.7
GTEX-11DXZ-1326-SM-5H11X 805.9
GTEX-13CF3-1226-SM-5LZXN 799.2
GTEX-133LE-1426-SM-5IFH1 796.6
GTEX-11I78-1126-SM-5A5K5 795.9
GTEX-11P7K-1626-SM-5GU63 794.6
GTEX-1399R-2026-SM-5K7WN 757.5
GTEX-145LT-1026-SM-5LU9O 750.9
GTEX-13O21-1026-SM-5IJDU 746.1
GTEX-Y114-1426-SM-4TT6W 743.5
GTEX-1399S-2026-SM-5KM4B 732.3
GTEX-XBED-1426-SM-4AT4G 723.7
GTEX-11EQ9-1326-SM-5985X 715.7
GTEX-ZQUD-0926-SM-57WE3 711.7
GTEX-XXEK-1026-SM-4BRUW 702.7
GTEX-ZF2S-1726-SM-57WFT 701.8
GTEX-XUZC-1426-SM-4BRV3 670.9
GTEX-14DAR-1426-SM-5RQIR 650.9
GTEX-ZTX8-0526-SM-59HLD 649.1
GTEX-YB5E-1526-SM-5IFIE 610.9
GTEX-YEC4-1726-SM-4W21E 608.5
GTEX-13FTW-2026-SM-5IJE2 600.0
GTEX-11DXX-1626-SM-5H11H 578.9
GTEX-WQUQ-2426-SM-4MVNW 567.5
GTEX-13PL7-2626-SM-5IFH4 566.9
GTEX-13D11-0726-SM-5LZZB 562.8
GTEX-Y9LG-1626-SM-5IFHM 562.1
GTEX-ZLV1-1126-SM-4WWBW 550.9
GTEX-ZVZP-1826-SM-5GZXB 477.5
GTEX-1122O-1326-SM-5H11F 459.7
GTEX-ZPCL-1726-SM-57WEO 444.4
GTEX-YF7O-1826-SM-5IFIU 438.5
GTEX-ZTSS-0926-SM-59865 326.5
GTEX-111YS-1426-SM-5GID8 326.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

578.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 578.3
FF:10024-101D6 15,40,85 years, mixed 578.3

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.