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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:85.3TPM
GTEx:14.0RPKM
FANTOM5:226.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Medium
 
 

Antibody staining

Antibody HPA019123

  

Antibody CAB022602

  

Adipocytes

 Medium   Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Medium   Low  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:High
Peripheral nerve:Medium
 
 

Antibody staining

Antibody HPA019123

  

Antibody CAB022602

  

Adipocytes

 Medium   Medium  

Fibroblasts

 High   Not detected  

Peripheral nerve

 Medium   Medium  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

85.3
N/A Female, age 80
Sample 1
TPM: 59.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 90.3
N/A Female, age 57
Sample 3
TPM: 71.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 91.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 113.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

14.0

GTEx sample id

RPKM
12.714.316.37.721.1024681012141618202224
 
12.714.316.37.721.1024681012141618202224

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 14.6
Samples: 350

Max RPKM: 25.5
Min RPKM: 7.7
Std RPKM: 2.7
Median RPKM: 14.3
GTEX-POYW-0726-SM-2XCEO 25.5
GTEX-WEY5-1926-SM-3GIL8 25.3
GTEX-ZZPU-2726-SM-5NQ8O 23.2
GTEX-SNMC-1326-SM-2XCFK 23.0
GTEX-O5YT-0226-SM-32PK5 22.1
GTEX-ZE7O-0226-SM-5S2N1 22.1
GTEX-11WQC-2426-SM-5EQKQ 22.0
GTEX-ZLV1-1826-SM-5FQU5 21.1
Show all
11.112.914.85.920.10246810121416182022
 
11.112.914.85.920.10246810121416182022

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 13.0
Samples: 227

Max RPKM: 23.8
Min RPKM: 5
Std RPKM: 2.7
Median RPKM: 12.9
GTEX-13PDP-1226-SM-5K7TW 23.8
GTEX-13IVO-2426-SM-5K7V9 22.3
GTEX-12ZZX-1726-SM-5BC63 21.2
GTEX-VUSG-1426-SM-3GIJN 20.1
GTEX-139YR-0326-SM-5J1MC 19.3
GTEX-ZXG5-1626-SM-59HJK 19.3
GTEX-11NV4-1426-SM-5BC4W 19.1
GTEX-ZYFC-1826-SM-5GZZA 19.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

226.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 226.4
FF:10010-101C1 65,65,76 years, mixed 226.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.