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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:360.6TPM
GTEx:21.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:High
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA019123

 

Antibody CAB022602

 

Endothelial cells

Not detected   Not detected  

Glial cells

High   High  

Neuronal cells

Not detected   Low  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

360.6

N/A Male, age 5
Sample 1
TPM: 259.0
overview Female, age 40
Sample 2
TPM: 499.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 322.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

21.0

GTEx sample id

RPKM

16.019.925.86.738.60510152025303540455055
 
16.019.925.86.738.60510152025303540455055

Brain - Cortex

Brain - Cortex
RPKM: 21.5
Samples: 114

Max RPKM: 59
Min RPKM: 6.7
Std RPKM: 8
Median RPKM: 19.9
GTEX-13G51-3026-SM-5IJB8 59.0
GTEX-UTHO-3026-SM-3GAFB 41.7
GTEX-13IVO-2926-SM-5L3CZ 40.7
GTEX-144FL-3026-SM-5O99C 38.6
GTEX-N7MT-1126-SM-5SI7V 36.8
GTEX-1192X-3126-SM-5N9BY 35.7
GTEX-QMR6-1426-SM-32PLA 34.8
GTEX-1445S-3026-SM-5O9BR 34.5
GTEX-QVUS-2826-SM-3GADB 34.4
GTEX-PWO3-0926-SM-2I5EY 33.8
GTEX-QDT8-2926-SM-32PKC 32.8
GTEX-13OVJ-2826-SM-5L3GW 31.8
GTEX-13X6K-2926-SM-5Q5D5 31.5
GTEX-13FHP-3026-SM-5IJBS 31.4
GTEX-13OW7-3026-SM-5L3GY 30.4
GTEX-11TTK-2926-SM-5PNYP 30.2
GTEX-139T8-1026-SM-5J2MC 29.7
GTEX-12ZZY-3026-SM-5GCOU 29.2
GTEX-111FC-3126-SM-5GZZ2 29.1
GTEX-NPJ8-1526-SM-2D7VU 28.9
GTEX-12WSA-2926-SM-5EQ4D 28.4
GTEX-11GSP-3226-SM-5986O 28.0
GTEX-13JVG-3126-SM-5L3FH 27.8
GTEX-13FHO-3026-SM-5J1O9 27.4
GTEX-13PVQ-3026-SM-5SI93 27.4
GTEX-13NYB-3026-SM-5IJD7 26.8
GTEX-147GR-3026-SM-5S2ML 26.4
GTEX-11GS4-3126-SM-5A5LH 26.2
GTEX-13OW8-2826-SM-5L3GC 25.8
GTEX-12WSD-3126-SM-5HL7P 25.7
GTEX-12ZZZ-3026-SM-5BC67 25.2
GTEX-XLM4-3026-SM-4AT6L 25.0
GTEX-11EI6-3026-SM-5GZZO 24.6
GTEX-OXRN-2426-SM-2I5EQ 24.3
GTEX-13JUV-2926-SM-5LZX7 24.2
GTEX-131XW-3126-SM-5LZUC 23.8
GTEX-13X6J-3026-SM-5Q5CU 23.8
GTEX-RU72-3026-SM-5SI7Y 23.5
GTEX-ZAK1-3026-SM-5S2MJ 23.4
GTEX-NPJ7-2726-SM-2I3FT 23.3
GTEX-11WQK-3026-SM-5EQL6 22.8
GTEX-14A5I-2926-SM-5Q5CQ 22.6
GTEX-ZE7O-3126-SM-5HL5X 22.4
GTEX-11ONC-2926-SM-5P9JM 22.2
GTEX-13NYS-3126-SM-5KLYV 22.1
GTEX-13OW6-3026-SM-5J2MI 21.6
GTEX-11O72-2926-SM-5BC4V 21.4
GTEX-11EMC-3226-SM-5EGKW 21.2
GTEX-11OC5-0726-SM-5P9JK 21.0
GTEX-12ZZW-2926-SM-5LZUP 20.5
GTEX-11GSO-2926-SM-5HL73 20.3
GTEX-1399T-3026-SM-5KLZC 20.2
GTEX-R55F-1326-SM-5S2V4 20.2
GTEX-13FLW-1426-SM-5K7YE 20.1
GTEX-1128S-2726-SM-5H12C 20.0
GTEX-11NV4-2126-SM-5N9DS 20.0
GTEX-12WSH-3026-SM-5CVNI 19.9
GTEX-13QIC-2926-SM-5J2NF 19.9
GTEX-13PL6-3126-SM-5LUAR 19.8
GTEX-1313W-3126-SM-5LZUI 19.7
GTEX-Y8DK-0826-SM-4TT3T 19.6
GTEX-ZZPT-3026-SM-5GZXH 19.6
GTEX-X4XX-3026-SM-3NMB2 19.5
GTEX-QVJO-1426-SM-2S1QY 19.4
GTEX-144GL-3026-SM-5Q5CW 19.2
GTEX-YFC4-3126-SM-5PNV6 19.0
GTEX-13OVH-3026-SM-5MR4N 18.9
GTEX-ZAJG-3126-SM-5HL9J 18.9
GTEX-11NUK-2926-SM-5A5MD 18.8
GTEX-145MF-2726-SM-5O995 18.6
GTEX-132Q8-3026-SM-5PNVG 18.5
GTEX-XOTO-3026-SM-4B65M 18.5
GTEX-13NYC-2826-SM-5K7WR 18.4
GTEX-11DXW-1126-SM-5H12Q 18.1
GTEX-WHSE-3026-SM-3P5ZH 18.1
GTEX-X585-3026-SM-46MWF 18.1
GTEX-11DXY-3226-SM-5GIDE 17.8
GTEX-WWYW-3126-SM-3NB39 17.6
GTEX-ZVT3-3026-SM-5E43N 17.6
GTEX-14ASI-3026-SM-5S2PN 17.1
GTEX-1117F-3226-SM-5N9CT 17.0
GTEX-145LS-3126-SM-5Q5BY 17.0
GTEX-13S7M-3126-SM-5RQJQ 16.9
GTEX-145MG-3026-SM-5RQJA 16.7
GTEX-14BMV-3026-SM-5S2PQ 16.1
GTEX-ZUA1-3026-SM-59HJC 15.9
GTEX-RNOR-2326-SM-2TF4I 15.6
GTEX-Y111-2726-SM-4TT3N 15.6
GTEX-13O3O-3126-SM-5KM3H 15.4
GTEX-Q2AG-2926-SM-2HMJ3 14.9
GTEX-131YS-3126-SM-5KLYT 14.8
GTEX-ZYFD-3026-SM-5E44C 14.7
GTEX-WZTO-2926-SM-3NM9I 14.6
GTEX-13O3Q-2926-SM-5KM45 14.5
GTEX-TSE9-3026-SM-3DB76 14.4
GTEX-11PRG-2926-SM-5987A 14.2
GTEX-T6MN-2626-SM-32PMQ 14.0
GTEX-12ZZX-2926-SM-5GCOQ 13.7
GTEX-PVOW-2526-SM-2XCF7 12.9
GTEX-WL46-2926-SM-3LK82 12.7
GTEX-YJ89-3026-SM-5IFJI 12.6
GTEX-13SLX-3126-SM-5S2Q5 12.4
GTEX-12126-1026-SM-5P9JJ 12.3
GTEX-13VXU-2926-SM-5LU5C 12.1
GTEX-T2IS-3026-SM-32QPM 12.0
GTEX-13FXS-3126-SM-5J2NN 11.8
GTEX-145MH-3026-SM-5Q5DZ 11.8
GTEX-117XS-3026-SM-5N9CA 11.5
GTEX-12WSC-3026-SM-5GCNF 11.5
GTEX-T5JC-2426-SM-3NMDB 11.4
GTEX-WVLH-3026-SM-3MJG9 11.3
GTEX-11ZUS-2926-SM-5FQSL 9.9
GTEX-Z93S-2926-SM-57WB9 8.0
GTEX-11OF3-2926-SM-5HL78 6.7
Show all
13.319.625.15.142.305101520253035404550
 
13.319.625.15.142.305101520253035404550

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 20.4
Samples: 108

Max RPKM: 50.8
Min RPKM: 5.1
Std RPKM: 9.5
Median RPKM: 19.6
GTEX-12WSD-0011-R10b-SM-5GU79 50.8
GTEX-ZE7O-0011-R10a-SM-57WAZ 50.4
GTEX-XMD1-0011-R10A-SM-4AT4A 46.6
GTEX-QDT8-0011-R10A-SM-32PKG 45.4
GTEX-1445S-0011-R10a-SM-5PNWB 42.3
GTEX-QVUS-0011-R10A-SM-3GIK3 36.8
GTEX-P44H-0011-R10A-SM-2XCEK 35.0
GTEX-13JVG-0011-R10b-SM-5KM2P 34.4
GTEX-139TS-0011-R10a-SM-5K7TU 33.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 33.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 33.4
GTEX-13SLW-0011-R10a-SM-5S2UI 33.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 32.8
GTEX-ZV68-0011-R10a-SM-51MT7 32.5
GTEX-12WSA-0011-R10b-SM-5P9ET 32.4
GTEX-14753-0011-R10b-SM-5S2WE 29.1
GTEX-13FLW-0011-R10b-SM-5LZZF 28.6
GTEX-ZAB4-0011-R10a-SM-4SOKH 28.4
GTEX-WWYW-0011-R10A-SM-3NB35 28.2
GTEX-11WQC-0011-R10a-SM-57WCT 27.9
GTEX-145LU-0011-R10a-SM-5PNWJ 27.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 27.7
GTEX-1477Z-0011-R10b-SM-5S2RF 27.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 26.9
GTEX-QMR6-0011-R10A-SM-32PKO 26.0
GTEX-13X6K-0011-R10a-SM-5P9JR 25.7
GTEX-OXRN-0011-R10A-SM-2I5GC 25.2
GTEX-11WQK-0011-R10a-SM-5BC6R 25.0
GTEX-13N2G-0011-R10a-SM-5MR34 24.9
GTEX-13JUV-0011-R10b-SM-5LZXR 24.4
GTEX-ZXG5-0011-R10a-SM-57WDD 24.4
GTEX-OXRO-0011-R10A-SM-2I5EH 24.0
GTEX-NL4W-0011-R10A-SM-2I3DY 23.8
GTEX-13OW8-0011-R10a-SM-5L3H6 22.9
GTEX-13X6I-0011-R10a-SM-5PNWI 22.9
GTEX-QVJO-0011-R10A-SM-2S1QJ 22.9
GTEX-13IVO-0011-R10a-SM-5LZY3 22.8
GTEX-13QJC-0011-R10a-SM-5SI63 22.6
GTEX-13FTZ-0011-R10b-SM-5KLZS 22.4
GTEX-13OVL-0011-R10a-SM-5L3GS 22.3
GTEX-XLM4-0011-R10A-SM-4AT5P 21.6
GTEX-13FHO-0011-R10b-SM-5J2MM 21.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 21.5
GTEX-14BIL-0011-R10a-SM-5SI75 21.4
GTEX-RVPU-0011-R10A-SM-2XCAH 21.1
GTEX-X261-0011-R10B-SM-4E3JT 21.1
GTEX-X4EP-0011-R10B-SM-4QASJ 20.9
GTEX-12126-0011-R10b-SM-5BC6T 20.7
GTEX-YFC4-0011-R10a-SM-4SOK5 20.7
GTEX-ZUA1-0011-R10a-SM-51MT6 20.5
GTEX-147F4-0011-R10b-SM-5S2WC 20.2
GTEX-TSE9-0011-R10A-SM-3DB7O 19.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 19.6
GTEX-13S7M-0011-R10b-SM-5PNZB 19.6
GTEX-13CZV-0011-R10b-SM-5LZYD 19.5
GTEX-ZVT3-0011-R10b-SM-57WB6 19.1
GTEX-NPJ7-0011-R10A-SM-2I3E5 18.8
GTEX-11H98-0011-R10b-SM-5NQ98 18.6
GTEX-NPJ8-0011-R10A-SM-2YUMO 18.4
GTEX-13G51-0011-R10b-SM-5LZYF 18.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 17.6
GTEX-131XW-0011-R10a-SM-5DUVA 17.4
GTEX-S7SE-0011-R10A-SM-2XCDF 17.2
GTEX-X4XX-0011-R10B-SM-46MWO 17.0
GTEX-11ZUS-0011-R10b-SM-5BC79 16.8
GTEX-12WSM-0011-R10a-SM-5DUWV 16.7
GTEX-12WSH-0011-R10a-SM-5LZUS 16.4
GTEX-13OW6-0011-R10a-SM-5L3HE 15.8
GTEX-WVLH-0011-R10A-SM-3MJFM 15.7
GTEX-13FXS-0011-R10a-SM-5J2MA 15.6
GTEX-N7MT-0011-R10A-SM-2I3E1 15.4
GTEX-YJ89-0011-R10a-SM-4SOK9 15.1
GTEX-ZF28-0011-R10a-SM-4WWEH 14.8
GTEX-145MG-0011-R10a-SM-5PNWG 14.7
GTEX-147GR-0011-R10b-SM-5S2UM 14.7
GTEX-131XH-0011-R10a-SM-5EGLJ 14.5
GTEX-145LS-0011-R10a-SM-5PNUQ 14.4
GTEX-131YS-0011-R10b-SM-5EQ5N 13.7
GTEX-13NYB-0011-R10a-SM-5KM43 13.5
GTEX-13NZA-0011-R10b-SM-5KM54 13.5
GTEX-13QIC-0011-R10a-SM-5O9C7 13.3
GTEX-13O3O-0011-R10a-SM-5LUA9 13.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 12.8
GTEX-13NYS-0011-R10a-SM-5MR4S 12.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 12.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 12.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 12.3
GTEX-12WSF-0011-R10a-SM-5LZVH 12.0
GTEX-T5JC-0011-R10A-SM-32PM2 11.6
GTEX-X585-0011-R10A-SM-46MUY 11.5
GTEX-Z93S-0011-R10a-SM-4RGNM 11.4
GTEX-13X6J-0011-R10b-SM-5PNWA 11.3
GTEX-13N1W-0011-R10b-SM-5MR4H 11.2
GTEX-14ASI-0011-R10b-SM-5S2VZ 10.9
GTEX-145MH-0011-R10b-SM-5PNUK 10.6
GTEX-N7MS-0011-R10A-SM-2HMJK 10.3
GTEX-13O3Q-0011-R10b-SM-5KM39 9.9
GTEX-12ZZX-0011-R10b-SM-5DUWK 9.6
GTEX-WZTO-0011-R10B-SM-4E3KB 9.4
GTEX-12WSC-0011-R10a-SM-5GU57 9.3
GTEX-14BIN-0011-R10a-SM-5S2UA 9.2
GTEX-T6MN-0011-R10A-SM-32QP7 9.2
GTEX-13OW7-0011-R10a-SM-5L3H3 9.0
GTEX-NL3H-0011-R10A-SM-2I3E9 7.3
GTEX-WL46-0011-R10A-SM-3MJFQ 6.0
GTEX-13SLX-0011-R10a-SM-5P9HV 5.6
GTEX-12WSE-0011-R10b-SM-5P9JV 5.1
GTEX-1313W-0011-R10b-SM-5DUXA 5.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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