Tissue expression of HMGCS1 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	204.6	TPM
GTEx:	34.3	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glial cells:	Not detected
Neuronal cells:	Medium
Neuropil:	Low

Antibody staining	Antibody HPA036913	Antibody HPA036914	Antibody CAB032907
Endothelial cells	Not detected	Not detected	Medium
Glial cells	Not detected	Not detected	Low
Neuronal cells	Not detected	Medium	Medium
Neuropil	Low	Low	Low

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	204.6

Male, age 5

Sample 1
TPM: 202.1

Female, age 40

Sample 2
TPM: 187.5

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 224.4

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	34.3

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 30.3

Samples: 114

Max RPKM: 79.9
Min RPKM: 8.5
Std RPKM: 11.7
Median RPKM: 29.4

GTEX-13OVJ-2826-SM-5L3GW

79.9

GTEX-WHSE-3026-SM-3P5ZH

71.2

GTEX-13NYC-2826-SM-5K7WR

56.6

GTEX-ZAK1-3026-SM-5S2MJ

55.1

GTEX-11NUK-2926-SM-5A5MD

54.1

GTEX-11WQK-3026-SM-5EQL6

51.4

GTEX-PVOW-2526-SM-2XCF7

50.5

GTEX-T2IS-3026-SM-32QPM

48.9

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 38.4

Samples: 108

Max RPKM: 202.4
Min RPKM: 6.3
Std RPKM: 21.3
Median RPKM: 37.8

GTEX-13OVJ-0011-R10b-SM-5L3HT

202.4

GTEX-WVLH-0011-R10A-SM-3MJFM

81.9

GTEX-13N2G-0011-R10a-SM-5MR34

72.1

GTEX-12WSE-0011-R10b-SM-5P9JV

70.4

GTEX-S7SE-0011-R10A-SM-2XCDF

63.5

GTEX-T5JC-0011-R10A-SM-32PM2

62.5

GTEX-WL46-0011-R10A-SM-3MJFQ

62.0

GTEX-WZTO-0011-R10B-SM-4E3KB

60.8

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue